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The map label for this gene is spoVAF [H]

Identifier: 138895873

GI number: 138895873

Start: 2352657

End: 2354135

Strand: Reverse

Name: spoVAF [H]

Synonym: GTNG_2232

Alternate gene names: 138895873

Gene position: 2354135-2352657 (Counterclockwise)

Preceding gene: 138895874

Following gene: 138895872

Centisome position: 66.31

GC content: 50.91

Gene sequence:

>1479_bases
ATGCCGGAAAAAGAGAAGAAGGGAAAAGTGCCGATCGCGGAGAAACTCGTTGATAACGCCAAGTTTTTGCAAAACCGAAT
CGGTGTCGGCACAAGCTTTGACTTGGGCGTGCGAAAAATTCATGTGCTAAACCGGGAGGTACATATTTATTACTGCAACG
GTTTATGTGACACGCAATACATTATTGAATTGTTAAAACAAATCGTGCGCGTCAACGACGATGAGCGCCAAGCCGCCCAA
GCGCGGCAAATTATCGAGAACCGGCTCGTCCATCAGCAAGTGAGCCCGGTGACGAGTCTTGATGAAGCAGTCGATCAGCT
GCTGTCTGGATTGATCATCATCTTCATTGAAGGAGAATCAACTGGATTTGCTGTTGACGTCCGCAGCTATCCAGGCCGCC
AGCCGCAAGAGCCGGACACGGAAAAAGTCGTGCGCGGCGCCCGTGACGGGTATGTTGAAAACATTATCGTCAATACAGCA
TTGACGCGGCGCCGCATTCGCGATGAACGGCTTCGCTTTGAAATTTTGCAAGTTGGCGAACGGTCGAAAACCGATATATG
CATCGCGTATATTCAAGATGTCGCCGACCCAGGGCTTGTTGAGCTCGTCAAAAACGAATTGAAACAGATTAATATTGATG
GGTTGACGATGGGCGACAAAACGGTAGAGGAATTTTTAGTCAAGCAAGGGTATAACCCGTATCCGCTCGTCCGCTACACG
GAGCGGCCGGACGTCGCGGCGACGCATTTGCTTGAAGGGCATGTACTTATTATGGTTGATACGTCGCCGAGCGTCATTAT
TACACCGACAACGTTCTTCCACCATGTCCAGCATGCGGAAGAGTACCGGCAGTCACCAGGGGTCGGGACGTTCGTCCGTT
GGGTGCGGTTTTTAGGCATTTTGTCGTCGCTGTTTTTGCTGCCGCTTTGGATGCTGTTTGTGCTCGAGCCGTCGCTCTTG
CCGGACTCGTGGGCGTTTATCGGTCCAAACAAACAGACAAACATTCCAGTTGTCATCCAAATTTTGATCGCTGATTTCGG
GATTGAGTTCTTGCGGATGGCAGCTATTCATACACCGACGCCGCTGTCGACGGCAATGGGCTTAATCGCTGCCGTCCTAA
TCGGGCAAATCGCCATCGATGTTGGGTTGTTTGTGCCGGAAGTCATTTTGTACGTCGCAGTAGCGGCGATCGGCTCATTT
GCAACGCCAAGCTATGAGCTGAGTATAGCCAATAAAATTTGCCGCTTAGCGCTTGTTATATTGGTTGCCTTATTTAAAGT
GCCTGGGCTCGTTATCGGTACGACCGTTTATTTCCTTTGGTTAGCCAGCATCCGCTCGCTGAACACACCGTACTTATGGC
CGTTCATTCCCTTTGATCCGGCGGCATTTATGCAAATTATCGTCCGCCGTTCGACCGCTGGAGCGAAAGTGCGGCCGAGC
ATCGTCCATCCACAAGACCAGCAAAAGCAGCCGTCATGA

Upstream 100 bases:

>100_bases
ATCGGCGATATCGGCAAAATGGGGTATCGCGACAATGCGAAAAACGGAGCGCCCATTACGCGCAAGGCGGTCGAGTTGAT
TCTGGAAAGGAGTGGTGGCT

Downstream 100 bases:

>100_bases
CGTCCATCGCGTCTATTTTCTCCATCACGGTTTAAGCGGTCGTTTCCGATGGCACATATTGACGGCCGCTTTTCTCGTGA
TGGCGCTATTGCAACTTTTC

Product: stage V sporulation protein AF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 492; Mature: 491

Protein sequence:

>492_residues
MPEKEKKGKVPIAEKLVDNAKFLQNRIGVGTSFDLGVRKIHVLNREVHIYYCNGLCDTQYIIELLKQIVRVNDDERQAAQ
ARQIIENRLVHQQVSPVTSLDEAVDQLLSGLIIIFIEGESTGFAVDVRSYPGRQPQEPDTEKVVRGARDGYVENIIVNTA
LTRRRIRDERLRFEILQVGERSKTDICIAYIQDVADPGLVELVKNELKQINIDGLTMGDKTVEEFLVKQGYNPYPLVRYT
ERPDVAATHLLEGHVLIMVDTSPSVIITPTTFFHHVQHAEEYRQSPGVGTFVRWVRFLGILSSLFLLPLWMLFVLEPSLL
PDSWAFIGPNKQTNIPVVIQILIADFGIEFLRMAAIHTPTPLSTAMGLIAAVLIGQIAIDVGLFVPEVILYVAVAAIGSF
ATPSYELSIANKICRLALVILVALFKVPGLVIGTTVYFLWLASIRSLNTPYLWPFIPFDPAAFMQIIVRRSTAGAKVRPS
IVHPQDQQKQPS

Sequences:

>Translated_492_residues
MPEKEKKGKVPIAEKLVDNAKFLQNRIGVGTSFDLGVRKIHVLNREVHIYYCNGLCDTQYIIELLKQIVRVNDDERQAAQ
ARQIIENRLVHQQVSPVTSLDEAVDQLLSGLIIIFIEGESTGFAVDVRSYPGRQPQEPDTEKVVRGARDGYVENIIVNTA
LTRRRIRDERLRFEILQVGERSKTDICIAYIQDVADPGLVELVKNELKQINIDGLTMGDKTVEEFLVKQGYNPYPLVRYT
ERPDVAATHLLEGHVLIMVDTSPSVIITPTTFFHHVQHAEEYRQSPGVGTFVRWVRFLGILSSLFLLPLWMLFVLEPSLL
PDSWAFIGPNKQTNIPVVIQILIADFGIEFLRMAAIHTPTPLSTAMGLIAAVLIGQIAIDVGLFVPEVILYVAVAAIGSF
ATPSYELSIANKICRLALVILVALFKVPGLVIGTTVYFLWLASIRSLNTPYLWPFIPFDPAAFMQIIVRRSTAGAKVRPS
IVHPQDQQKQPS
>Mature_491_residues
PEKEKKGKVPIAEKLVDNAKFLQNRIGVGTSFDLGVRKIHVLNREVHIYYCNGLCDTQYIIELLKQIVRVNDDERQAAQA
RQIIENRLVHQQVSPVTSLDEAVDQLLSGLIIIFIEGESTGFAVDVRSYPGRQPQEPDTEKVVRGARDGYVENIIVNTAL
TRRRIRDERLRFEILQVGERSKTDICIAYIQDVADPGLVELVKNELKQINIDGLTMGDKTVEEFLVKQGYNPYPLVRYTE
RPDVAATHLLEGHVLIMVDTSPSVIITPTTFFHHVQHAEEYRQSPGVGTFVRWVRFLGILSSLFLLPLWMLFVLEPSLLP
DSWAFIGPNKQTNIPVVIQILIADFGIEFLRMAAIHTPTPLSTAMGLIAAVLIGQIAIDVGLFVPEVILYVAVAAIGSFA
TPSYELSIANKICRLALVILVALFKVPGLVIGTTVYFLWLASIRSLNTPYLWPFIPFDPAAFMQIIVRRSTAGAKVRPSI
VHPQDQQKQPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gerABKA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004995 [H]

Pfam domain/function: PF03323 GerA [H]

EC number: NA

Molecular weight: Translated: 55092; Mature: 54961

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEKEKKGKVPIAEKLVDNAKFLQNRIGVGTSFDLGVRKIHVLNREVHIYYCNGLCDTQY
CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCEEEEEEECCCCCHHH
IIELLKQIVRVNDDERQAAQARQIIENRLVHQQVSPVTSLDEAVDQLLSGLIIIFIEGES
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCC
TGFAVDVRSYPGRQPQEPDTEKVVRGARDGYVENIIVNTALTRRRIRDERLRFEILQVGE
CCEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSKTDICIAYIQDVADPGLVELVKNELKQINIDGLTMGDKTVEEFLVKQGYNPYPLVRYT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEECCHHHHHHHHHHCCCCCCCEEEEC
ERPDVAATHLLEGHVLIMVDTSPSVIITPTTFFHHVQHAEEYRQSPGVGTFVRWVRFLGI
CCCCHHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LSSLFLLPLWMLFVLEPSLLPDSWAFIGPNKQTNIPVVIQILIADFGIEFLRMAAIHTPT
HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PLSTAMGLIAAVLIGQIAIDVGLFVPEVILYVAVAAIGSFATPSYELSIANKICRLALVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
LVALFKVPGLVIGTTVYFLWLASIRSLNTPYLWPFIPFDPAAFMQIIVRRSTAGAKVRPS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
IVHPQDQQKQPS
CCCCCCCCCCCC
>Mature Secondary Structure 
PEKEKKGKVPIAEKLVDNAKFLQNRIGVGTSFDLGVRKIHVLNREVHIYYCNGLCDTQY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCEEEEEEECCCCCHHH
IIELLKQIVRVNDDERQAAQARQIIENRLVHQQVSPVTSLDEAVDQLLSGLIIIFIEGES
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCEEEEEEECCC
TGFAVDVRSYPGRQPQEPDTEKVVRGARDGYVENIIVNTALTRRRIRDERLRFEILQVGE
CCEEEEECCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
RSKTDICIAYIQDVADPGLVELVKNELKQINIDGLTMGDKTVEEFLVKQGYNPYPLVRYT
CCCCHHHHHHHHHCCCCHHHHHHHHHHHEECCCCEECCHHHHHHHHHHCCCCCCCEEEEC
ERPDVAATHLLEGHVLIMVDTSPSVIITPTTFFHHVQHAEEYRQSPGVGTFVRWVRFLGI
CCCCHHHHHHHCCEEEEEEECCCCEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
LSSLFLLPLWMLFVLEPSLLPDSWAFIGPNKQTNIPVVIQILIADFGIEFLRMAAIHTPT
HHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
PLSTAMGLIAAVLIGQIAIDVGLFVPEVILYVAVAAIGSFATPSYELSIANKICRLALVI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHH
LVALFKVPGLVIGTTVYFLWLASIRSLNTPYLWPFIPFDPAAFMQIIVRRSTAGAKVRPS
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHCCCCCCCCCC
IVHPQDQQKQPS
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377; 7934829; 1368705; 3926949 [H]