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The map label for this gene is yvrB [H]

Identifier: 138895839

GI number: 138895839

Start: 2321266

End: 2322300

Strand: Reverse

Name: yvrB [H]

Synonym: GTNG_2198

Alternate gene names: 138895839

Gene position: 2322300-2321266 (Counterclockwise)

Preceding gene: 138895840

Following gene: 138895838

Centisome position: 65.41

GC content: 56.71

Gene sequence:

>1035_bases
ATGTGTTTAAGTAAAGCGTGGCTATATATCGCGGCCGCTGCTGCGGCCGTCTTTTCACTGCTCATAGGGATATCGACCGG
GTCGCTGTCGATCCCCTTTTCATCGATTGTTCGGATTGTTGCTGCTGAATGGACCGGCATACCACTTCCGCCTGACATGC
CGGCGGATTGGGTGCCGATTGTGATGGAGATCCGCATGCCGCGCGTGGTGCTCGCCTTTTTGGTCGGGGCTTCATTGGCA
CTTGCCGGAGCCGCATTTCAAGGACTGTTGAAAAACGCGCTCGCTGATCCATATACGCTGGGCGTTTCGTCTGGTGCCTC
CGTCGGGGCGGTGCTCGTCATCTTTCTCGGCTGGCAATGGCCGTTGTTTGGCACGTTTACGCTGCCGATCGTGAGCATCT
TATGCGGCATGGCGACGCTTGCCGCTGTGTTGGCGTTCACCCGCGCGGTTGAACGGCGAATGTCGGTTGAGACGATCATT
TTAGCCGGCATTATTTTCGGCGCCTTCTTCAGCGCTTTCATTTCGCTCATGATTGCCTTGACGGGTGAGGAGCTGCGGCA
AATTATTTCATGGCTGATGGGGAGCGTGGCGATGCGCGGATGGAAGTATAGCGGATTATTGTTTCCGTTTTTTCTCATTG
GTGTGGCAACGCTTATCGTCAACGCCCGTGAACTGAACGCGTTCGCGTTCGGCGAAGCGGCAGCGCTTCACGTCGGCGTC
GATGTCACTCGCCGCAAAATCATCATTTTGACAGCGGCCGCGCTGCTCACCGGTGCGGCGGTGTCGGTGTCGGGAACGAT
CGGCTTTGTCGGGCTTGTCGTCCCACACATGGTTCGGCTTGTGTGCGGACCAAACTATCGGGTGCTTTTGCCGCTGTCGC
TTTTGTACGGTGGGTCGTTTCTTGTGCTCGCCGATGTGGTGGCACGGACGATCATTGAGCCGCGTGAGCTGCCGATCGGT
GTCATTACATCGCTCATCGGCGCCCCGTTGTTTGCCGCCCTATTTTTCCGAAAAACGAAACGAAAGATGGGATGA

Upstream 100 bases:

>100_bases
AAAAATAAGCGAGTGTATGACGTTAACACCGACTTAGTGAGCCGGCCGGGTCCGCGTCTTGTTGAAGGAGTCGAGGAACT
TGCCAAAGCTATTTACCCGG

Downstream 100 bases:

>100_bases
TGATGCTCGATGTGCGTGCCGTATCGCATCGGTATGGACAGAAACAAGTGCTTGACGGCGTGACGTTTTCCGTCAAAAAA
GGAGAGTTGTTTGGCATTTT

Product: ferric ion ABC transporter permease

Products: ADP; phosphate; cob(I)alamin [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 344; Mature: 344

Protein sequence:

>344_residues
MCLSKAWLYIAAAAAAVFSLLIGISTGSLSIPFSSIVRIVAAEWTGIPLPPDMPADWVPIVMEIRMPRVVLAFLVGASLA
LAGAAFQGLLKNALADPYTLGVSSGASVGAVLVIFLGWQWPLFGTFTLPIVSILCGMATLAAVLAFTRAVERRMSVETII
LAGIIFGAFFSAFISLMIALTGEELRQIISWLMGSVAMRGWKYSGLLFPFFLIGVATLIVNARELNAFAFGEAAALHVGV
DVTRRKIIILTAAALLTGAAVSVSGTIGFVGLVVPHMVRLVCGPNYRVLLPLSLLYGGSFLVLADVVARTIIEPRELPIG
VITSLIGAPLFAALFFRKTKRKMG

Sequences:

>Translated_344_residues
MCLSKAWLYIAAAAAAVFSLLIGISTGSLSIPFSSIVRIVAAEWTGIPLPPDMPADWVPIVMEIRMPRVVLAFLVGASLA
LAGAAFQGLLKNALADPYTLGVSSGASVGAVLVIFLGWQWPLFGTFTLPIVSILCGMATLAAVLAFTRAVERRMSVETII
LAGIIFGAFFSAFISLMIALTGEELRQIISWLMGSVAMRGWKYSGLLFPFFLIGVATLIVNARELNAFAFGEAAALHVGV
DVTRRKIIILTAAALLTGAAVSVSGTIGFVGLVVPHMVRLVCGPNYRVLLPLSLLYGGSFLVLADVVARTIIEPRELPIG
VITSLIGAPLFAALFFRKTKRKMG
>Mature_344_residues
MCLSKAWLYIAAAAAAVFSLLIGISTGSLSIPFSSIVRIVAAEWTGIPLPPDMPADWVPIVMEIRMPRVVLAFLVGASLA
LAGAAFQGLLKNALADPYTLGVSSGASVGAVLVIFLGWQWPLFGTFTLPIVSILCGMATLAAVLAFTRAVERRMSVETII
LAGIIFGAFFSAFISLMIALTGEELRQIISWLMGSVAMRGWKYSGLLFPFFLIGVATLIVNARELNAFAFGEAAALHVGV
DVTRRKIIILTAAALLTGAAVSVSGTIGFVGLVVPHMVRLVCGPNYRVLLPLSLLYGGSFLVLADVVARTIIEPRELPIG
VITSLIGAPLFAALFFRKTKRKMG

Specific function: Probably part of an ABC transporter complex. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0609

COG function: function code P; ABC-type Fe3+-siderophore transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily [H]

Homologues:

Organism=Escherichia coli, GI1788004, Length=295, Percent_Identity=36.271186440678, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790740, Length=278, Percent_Identity=34.8920863309352, Blast_Score=147, Evalue=1e-36,
Organism=Escherichia coli, GI1790741, Length=310, Percent_Identity=33.5483870967742, Blast_Score=138, Evalue=5e-34,
Organism=Escherichia coli, GI1786805, Length=286, Percent_Identity=34.2657342657343, Blast_Score=112, Evalue=5e-26,
Organism=Escherichia coli, GI1786347, Length=298, Percent_Identity=30.5369127516779, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1786804, Length=293, Percent_Identity=28.6689419795222, Blast_Score=84, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000522 [H]

Pfam domain/function: PF01032 FecCD [H]

EC number: NA

Molecular weight: Translated: 36454; Mature: 36454

Theoretical pI: Translated: 10.34; Mature: 10.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCLSKAWLYIAAAAAAVFSLLIGISTGSLSIPFSSIVRIVAAEWTGIPLPPDMPADWVPI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VMEIRMPRVVLAFLVGASLALAGAAFQGLLKNALADPYTLGVSSGASVGAVLVIFLGWQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCC
PLFGTFTLPIVSILCGMATLAAVLAFTRAVERRMSVETIILAGIIFGAFFSAFISLMIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGEELRQIISWLMGSVAMRGWKYSGLLFPFFLIGVATLIVNARELNAFAFGEAAALHVGV
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCHHEEEECC
DVTRRKIIILTAAALLTGAAVSVSGTIGFVGLVVPHMVRLVCGPNYRVLLPLSLLYGGSF
HHHHHEEHEEEHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHH
LVLADVVARTIIEPRELPIGVITSLIGAPLFAALFFRKTKRKMG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MCLSKAWLYIAAAAAAVFSLLIGISTGSLSIPFSSIVRIVAAEWTGIPLPPDMPADWVPI
CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHH
VMEIRMPRVVLAFLVGASLALAGAAFQGLLKNALADPYTLGVSSGASVGAVLVIFLGWQW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCC
PLFGTFTLPIVSILCGMATLAAVLAFTRAVERRMSVETIILAGIIFGAFFSAFISLMIAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGEELRQIISWLMGSVAMRGWKYSGLLFPFFLIGVATLIVNARELNAFAFGEAAALHVGV
CHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCHHHCCCHHEEEECC
DVTRRKIIILTAAALLTGAAVSVSGTIGFVGLVVPHMVRLVCGPNYRVLLPLSLLYGGSF
HHHHHEEHEEEHHHHHHCCHHEECCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCHH
LVLADVVARTIIEPRELPIGVITSLIGAPLFAALFFRKTKRKMG
HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; cob(I)alamin [Periplasm]; H2O [C]

Specific reaction: ATP + cob(I)alamin [Periplasm] + H2O = ADP + phosphate + cob(I)alamin [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]