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The map label for this gene is cobC [C]

Identifier: 138895833

GI number: 138895833

Start: 2315852

End: 2316502

Strand: Reverse

Name: cobC [C]

Synonym: GTNG_2192

Alternate gene names: 138895833

Gene position: 2316502-2315852 (Counterclockwise)

Preceding gene: 138895834

Following gene: 138895832

Centisome position: 65.25

GC content: 58.37

Gene sequence:

>651_bases
ATGGGGCGTCGTTTGGCTATTACATTCATCCGCCATGGGATGACAGCGTTGAACCGCCAGCGGGCGTATATTGGTTGGAC
GGATGCGCCGTTGGCTGCTGCTGAGCGCGTTCGGCTCAGCAGCCTAAAGCCCAAGCTGCCTATGGCGGTTGACCGGATTG
TTTCGAGCGATCTTCGCCGCTGCCGGGAAACGGCTGCCTTATTGTTCGGCGGCCGTCCAGCGGACTGGTGGACAAGCTGG
TGGCGCGAGCTGTCGTTTGGCGATTGGGAAGGAAAGACCTTCGCCGAGTTAAACGAGGATCCGGCATACCGCCAATGGCT
TGAAGCGCCGTTTTCTGTGGCGCCACCCGGCGGAGAAAGCTATGCTGGTTTTCAGAAGCGCATCAAACAGGCGTTCACAA
AGACGCTCGCTTTGGCTGAGCGAAGCGGTGCCCGTCATATCGCCATCATCACCCACGGCGGCCCGATCCGCTTCATGCTC
GAGCAATATGCACCGACTTCGCGTTCCTTTTGGGAATGGGACGTGCCGTTTGCAGGCGGGTATACGCTTGATTCAACGAT
CGGGCGCTGGAAGGGGGGAGAGCGATGCATTTCGTTGTCGGCGGTGCGTTTCAAGGAAAACGAAAATGGGTGCGGGAACG
ATATGGAATAG

Upstream 100 bases:

>100_bases
CGCTTTTGGCGTTAGGGGCCAAGCCATGGGTGGAAAAACAGTTTGGCGGCGTTACCGGCGATGTGCTCGGAGCGCTGATT
GAAGGAGGGGAGACGCTTTT

Downstream 100 bases:

>100_bases
GAGACGGCGTTCAGATTGTATGGCATGACGGCTATCAAGAGCCATACGGGCCGCCGAACGGCGTCAAGGTGGCGAAAACG
GTCGTCTTTGAGGGACTCGA

Product: alpha-ribazole-5'-phosphate phosphatase

Products: NA

Alternate protein names: Alpha-Ribazole-5-Phosphate Phosphatase; Fructose-2 6-Bisphosphatase; Alpha-Ribazole Phosphatase; Bifunctional RNAse H/Acid Phosphatase; Phosphoglycerate Mutase Family Protein; Phosphoglycerate/Bisphosphoglycerate Mutase; Phosphatase; Phosphoglycerate Mutase Domain Protein; Ribonuclease HI; Phosphoglycerate Mutase GpmB; Aminotransferase Class I And II; Phosphoglycerate Mutase 2 Protein; Mutase; Phosphoglycerate Mutase Variant

Number of amino acids: Translated: 216; Mature: 215

Protein sequence:

>216_residues
MGRRLAITFIRHGMTALNRQRAYIGWTDAPLAAAERVRLSSLKPKLPMAVDRIVSSDLRRCRETAALLFGGRPADWWTSW
WRELSFGDWEGKTFAELNEDPAYRQWLEAPFSVAPPGGESYAGFQKRIKQAFTKTLALAERSGARHIAIITHGGPIRFML
EQYAPTSRSFWEWDVPFAGGYTLDSTIGRWKGGERCISLSAVRFKENENGCGNDME

Sequences:

>Translated_216_residues
MGRRLAITFIRHGMTALNRQRAYIGWTDAPLAAAERVRLSSLKPKLPMAVDRIVSSDLRRCRETAALLFGGRPADWWTSW
WRELSFGDWEGKTFAELNEDPAYRQWLEAPFSVAPPGGESYAGFQKRIKQAFTKTLALAERSGARHIAIITHGGPIRFML
EQYAPTSRSFWEWDVPFAGGYTLDSTIGRWKGGERCISLSAVRFKENENGCGNDME
>Mature_215_residues
GRRLAITFIRHGMTALNRQRAYIGWTDAPLAAAERVRLSSLKPKLPMAVDRIVSSDLRRCRETAALLFGGRPADWWTSWW
RELSFGDWEGKTFAELNEDPAYRQWLEAPFSVAPPGGESYAGFQKRIKQAFTKTLALAERSGARHIAIITHGGPIRFMLE
QYAPTSRSFWEWDVPFAGGYTLDSTIGRWKGGERCISLSAVRFKENENGCGNDME

Specific function: Converts N1-(5-Phospho-Alpha-D-Ribosyl)-5,6- Dimethylbenzimidazole Into N1-Alpha-D-Ribosyl-5,6- Dimethylbenzimidazole; Involved In The Assembly Of The Nucleotide Loop Of Cobalamin. [C]

COG id: COG0406

COG function: function code G; Fructose-2,6-bisphosphatase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.1.3.73 [C]

Molecular weight: Translated: 24448; Mature: 24317

Theoretical pI: Translated: 9.75; Mature: 9.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRRLAITFIRHGMTALNRQRAYIGWTDAPLAAAERVRLSSLKPKLPMAVDRIVSSDLRR
CCCEEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
CRETAALLFGGRPADWWTSWWRELSFGDWEGKTFAELNEDPAYRQWLEAPFSVAPPGGES
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCC
YAGFQKRIKQAFTKTLALAERSGARHIAIITHGGPIRFMLEQYAPTSRSFWEWDVPFAGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEECCCCCCC
YTLDSTIGRWKGGERCISLSAVRFKENENGCGNDME
EEEHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCC
>Mature Secondary Structure 
GRRLAITFIRHGMTALNRQRAYIGWTDAPLAAAERVRLSSLKPKLPMAVDRIVSSDLRR
CCEEEHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
CRETAALLFGGRPADWWTSWWRELSFGDWEGKTFAELNEDPAYRQWLEAPFSVAPPGGES
HHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCHHHHHHHHCCCCCCCCCCCC
YAGFQKRIKQAFTKTLALAERSGARHIAIITHGGPIRFMLEQYAPTSRSFWEWDVPFAGG
HHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHCCCCCCCCEEECCCCCCC
YTLDSTIGRWKGGERCISLSAVRFKENENGCGNDME
EEEHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA