Click here to switch to the map view.

The map label for this gene is ypjD [H]

Identifier: 138895764

GI number: 138895764

Start: 2253014

End: 2253373

Strand: Reverse

Name: ypjD [H]

Synonym: GTNG_2120

Alternate gene names: 138895764

Gene position: 2253373-2253014 (Counterclockwise)

Preceding gene: 138895766

Following gene: 138895763

Centisome position: 63.47

GC content: 49.72

Gene sequence:

>360_bases
ATGGAAACAGACGAGGTGATGGTCATGCAGGAGAAAACGATGAAACAGATGCAACGCGAAGTGGAAGAATATATCGGGCA
GTTTAAAGAAGGTTATTTCAGCCCGCTCGCCATGCTCGCGCGGCTGACCGAAGAGCTCGGCGAACTGGCGCGTGAAGTGA
ACCATTATTATGGGGAAAAGCCGAAAAAGGTAACGGAAAAAGAAAAAACAGTGGAAGAAGAGCTGGGCGATTTGTTGTTT
GTACTCATCTGTTTTGCCAATTCGCTCAACATTGATTTGCAGGAGGCGCACGACCGGGTGATGGACAAGTTCCGGATCCG
CGACCGTGACCGTTGGACGCGAAAGGAGGAATCTCAATGA

Upstream 100 bases:

>100_bases
AATTATAGAGGAACTTGCCTGCGCAGGCAACGATGGTCGAAAGCAGGGGAAAATTGACGACTGGCGAAAACATTTGTCAA
ATGCGCCGCTTTTCGCTAAC

Downstream 100 bases:

>100_bases
CGATTCGCATCGTCATTGCCGGGCCACGCGGCCGCATGGGCCGTGAAGCGGTGGCACTTGTGCAAAGAACAGACCATTTT
GAACTGGCTGCGGTCATTGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
METDEVMVMQEKTMKQMQREVEEYIGQFKEGYFSPLAMLARLTEELGELAREVNHYYGEKPKKVTEKEKTVEEELGDLLF
VLICFANSLNIDLQEAHDRVMDKFRIRDRDRWTRKEESQ

Sequences:

>Translated_119_residues
METDEVMVMQEKTMKQMQREVEEYIGQFKEGYFSPLAMLARLTEELGELAREVNHYYGEKPKKVTEKEKTVEEELGDLLF
VLICFANSLNIDLQEAHDRVMDKFRIRDRDRWTRKEESQ
>Mature_119_residues
METDEVMVMQEKTMKQMQREVEEYIGQFKEGYFSPLAMLARLTEELGELAREVNHYYGEKPKKVTEKEKTVEEELGDLLF
VLICFANSLNIDLQEAHDRVMDKFRIRDRDRWTRKEESQ

Specific function: Unknown

COG id: COG1694

COG function: function code R; Predicted pyrophosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012359
- InterPro:   IPR004518 [H]

Pfam domain/function: PF03819 MazG [H]

EC number: NA

Molecular weight: Translated: 14268; Mature: 14268

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
6.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.9 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METDEVMVMQEKTMKQMQREVEEYIGQFKEGYFSPLAMLARLTEELGELAREVNHYYGEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKKVTEKEKTVEEELGDLLFVLICFANSLNIDLQEAHDRVMDKFRIRDRDRWTRKEESQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
METDEVMVMQEKTMKQMQREVEEYIGQFKEGYFSPLAMLARLTEELGELAREVNHYYGEK
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKKVTEKEKTVEEELGDLLFVLICFANSLNIDLQEAHDRVMDKFRIRDRDRWTRKEESQ
CHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377 [H]