| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is malE [C]
Identifier: 138895666
GI number: 138895666
Start: 2140975
End: 2142294
Strand: Reverse
Name: malE [C]
Synonym: GTNG_2022
Alternate gene names: 138895666
Gene position: 2142294-2140975 (Counterclockwise)
Preceding gene: 138895667
Following gene: 138895665
Centisome position: 60.34
GC content: 46.74
Gene sequence:
>1320_bases ATGAAAAAGAAAAAAGCGTTTCAATCATCAGCTATTTTGTTAGCGCTTACGATGGGACTTACGGCCTGCTCCGGCGGTGA AAATGCTGACGGTGATGGCAATAGCAAAACAGAAGGCAATAAAGAAAGCAAATCCAGCGAAGTGGTTAAGATTGTCTATG CCCGTGGCCAAGACTCGACGAAAGCAACCGAAAAGTTGATCGAAGCATTTGAAAAAGCACATCCGAACATCGATGTTGAA CTGCGGGAAATGCCGGCTGACACCGGCAAGCAGCATGATGCTTACGTTACGATGTTAAACGCCCAGTCGTCGGAAATCGA TGTTATGGACCTTGATGTGATCTGGCCGGCTGAATTCGCCCAAGCAGGCTATACGTTGCCATTGGACCGTTTCATTGAGA AAGATGGCATCGATTTAAGCAAATACAACCAAGGGGCGTTAGCCGCTGGAAACTTCAACGGTAAGCAATGGGCGATGCCG AAATTTATTGATACGGGCATGTTGTTTTATCGGACGGATTTAGTGCCTGAAGATAAAGTGCCGAAAACATGGGATGAACT GTTAAAAACAGCAAAGGAACTGAAAGGGCAAGGCGGTACGAAATTCGGTTATTTAATGCAAGCGAAACAATATGAAGGGC TTGTTTGTAACGCTGTTGAATTTATTGCTTCCTACGGGGGACAAATCGTTGACAAAGACGGAAACGTTGTCGTCAACAGT CCGGAAGCCATTAAAGGTTTGAAAAAAATGGTGGAGATCGTTCAATCGGATGTTGTGCCAAGCAACGTGACGACCTTTAT GGAACCTGAGTCTCACACCGCATTCATCGAAGGACAAGCACCGTTTATTCGCAACTGGCCGTATCAATATGCCTTGGCGA ACGATCAGGAACAATCAAAAATTGTCGGCAAAGTTAGCGTTGCTCCGCTCCCGGCTGGCGATAAAGGGTCAGCTGCAGCG CTTGGTGGCTGGATGACGGCAATCAACAAATATTCGAAACACCCGAAAGAAGCATGGGAATTCGTCAAATTTATGACCGG GCCGGAAGGGCAAAAAATCTCGGCCGTTTATGGCGGTTTAGCCCCGACATTGCCGGAGTTGTACGAGGATGAAGAGGTGT TGAAAGCCAATCCGTTCTTCGCTGAAAAAGGGTTTGTCAACGCCTTGAATGCAGCAGTGCCGCGTCCAGTGGTGCCAAAC TATCCGGAAATTTCCGAAATCATCCAAATTAACGTATCGAAGGCATTGGCCGGAGAGCTTACTGTTGAACAAGCGGTAGC AAACATGGAAAAAGAAATGAAGGCAGCGATGAATAAGTAA
Upstream 100 bases:
>100_bases CATTTCAGCCTAGGAGGTGATCCGGACCGCGCGAGAGATGTGTTGTTCGGTTTCACTCAAGCTTTATCATACAAAAAACA AGTAGGGGGATGGATAAGAA
Downstream 100 bases:
>100_bases AGCGGCTGTGTTGCTCGGCGCGGTGCAGCCCAAATGAGCAAGAAAAAATAACGGAGGAAGCCATTCGCTATGTATTAGCC TTCAGGCCGCTCTCTATCCG
Product: ABC transporter substrate-binding protein
Products: ADP; phosphate; maltose [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 439
Protein sequence:
>439_residues MKKKKAFQSSAILLALTMGLTACSGGENADGDGNSKTEGNKESKSSEVVKIVYARGQDSTKATEKLIEAFEKAHPNIDVE LREMPADTGKQHDAYVTMLNAQSSEIDVMDLDVIWPAEFAQAGYTLPLDRFIEKDGIDLSKYNQGALAAGNFNGKQWAMP KFIDTGMLFYRTDLVPEDKVPKTWDELLKTAKELKGQGGTKFGYLMQAKQYEGLVCNAVEFIASYGGQIVDKDGNVVVNS PEAIKGLKKMVEIVQSDVVPSNVTTFMEPESHTAFIEGQAPFIRNWPYQYALANDQEQSKIVGKVSVAPLPAGDKGSAAA LGGWMTAINKYSKHPKEAWEFVKFMTGPEGQKISAVYGGLAPTLPELYEDEEVLKANPFFAEKGFVNALNAAVPRPVVPN YPEISEIIQINVSKALAGELTVEQAVANMEKEMKAAMNK
Sequences:
>Translated_439_residues MKKKKAFQSSAILLALTMGLTACSGGENADGDGNSKTEGNKESKSSEVVKIVYARGQDSTKATEKLIEAFEKAHPNIDVE LREMPADTGKQHDAYVTMLNAQSSEIDVMDLDVIWPAEFAQAGYTLPLDRFIEKDGIDLSKYNQGALAAGNFNGKQWAMP KFIDTGMLFYRTDLVPEDKVPKTWDELLKTAKELKGQGGTKFGYLMQAKQYEGLVCNAVEFIASYGGQIVDKDGNVVVNS PEAIKGLKKMVEIVQSDVVPSNVTTFMEPESHTAFIEGQAPFIRNWPYQYALANDQEQSKIVGKVSVAPLPAGDKGSAAA LGGWMTAINKYSKHPKEAWEFVKFMTGPEGQKISAVYGGLAPTLPELYEDEEVLKANPFFAEKGFVNALNAAVPRPVVPN YPEISEIIQINVSKALAGELTVEQAVANMEKEMKAAMNK >Mature_439_residues MKKKKAFQSSAILLALTMGLTACSGGENADGDGNSKTEGNKESKSSEVVKIVYARGQDSTKATEKLIEAFEKAHPNIDVE LREMPADTGKQHDAYVTMLNAQSSEIDVMDLDVIWPAEFAQAGYTLPLDRFIEKDGIDLSKYNQGALAAGNFNGKQWAMP KFIDTGMLFYRTDLVPEDKVPKTWDELLKTAKELKGQGGTKFGYLMQAKQYEGLVCNAVEFIASYGGQIVDKDGNVVVNS PEAIKGLKKMVEIVQSDVVPSNVTTFMEPESHTAFIEGQAPFIRNWPYQYALANDQEQSKIVGKVSVAPLPAGDKGSAAA LGGWMTAINKYSKHPKEAWEFVKFMTGPEGQKISAVYGGLAPTLPELYEDEEVLKANPFFAEKGFVNALNAAVPRPVVPN YPEISEIIQINVSKALAGELTVEQAVANMEKEMKAAMNK
Specific function: Probably part of a binding-protein-dependent transport system [H]
COG id: COG1653
COG function: function code G; ABC-type sugar transport system, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: 660 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 720 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 240 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 47914; Mature: 47914
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKKKAFQSSAILLALTMGLTACSGGENADGDGNSKTEGNKESKSSEVVKIVYARGQDST CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH KATEKLIEAFEKAHPNIDVELREMPADTGKQHDAYVTMLNAQSSEIDVMDLDVIWPAEFA HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHH QAGYTLPLDRFIEKDGIDLSKYNQGALAAGNFNGKQWAMPKFIDTGMLFYRTDLVPEDKV HCCCCCCHHHHHHHCCCCHHHCCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCCCCC PKTWDELLKTAKELKGQGGTKFGYLMQAKQYEGLVCNAVEFIASYGGQIVDKDGNVVVNS CHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHCCCEEEECCCCEEECC PEAIKGLKKMVEIVQSDVVPSNVTTFMEPESHTAFIEGQAPFIRNWPYQYALANDQEQSK CHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCHHHCCCEEEEECCCCHHHH IVGKVSVAPLPAGDKGSAAALGGWMTAINKYSKHPKEAWEFVKFMTGPEGQKISAVYGGL HEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHCCC APTLPELYEDEEVLKANPFFAEKGFVNALNAAVPRPVVPNYPEISEIIQINVSKALAGEL CCCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHEEHHHHHHHHHH TVEQAVANMEKEMKAAMNK HHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKKKAFQSSAILLALTMGLTACSGGENADGDGNSKTEGNKESKSSEVVKIVYARGQDST CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCH KATEKLIEAFEKAHPNIDVELREMPADTGKQHDAYVTMLNAQSSEIDVMDLDVIWPAEFA HHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEEEECCHHHH QAGYTLPLDRFIEKDGIDLSKYNQGALAAGNFNGKQWAMPKFIDTGMLFYRTDLVPEDKV HCCCCCCHHHHHHHCCCCHHHCCCCCEEECCCCCCCCCCCHHHHCCEEEEEECCCCCCCC PKTWDELLKTAKELKGQGGTKFGYLMQAKQYEGLVCNAVEFIASYGGQIVDKDGNVVVNS CHHHHHHHHHHHHHCCCCCCCHHHHEEHHHCCCCHHHHHHHHHHCCCEEEECCCCEEECC PEAIKGLKKMVEIVQSDVVPSNVTTFMEPESHTAFIEGQAPFIRNWPYQYALANDQEQSK CHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEECCCCHHHCCCEEEEECCCCHHHH IVGKVSVAPLPAGDKGSAAALGGWMTAINKYSKHPKEAWEFVKFMTGPEGQKISAVYGGL HEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCEEHHHHCCC APTLPELYEDEEVLKANPFFAEKGFVNALNAAVPRPVVPNYPEISEIIQINVSKALAGEL CCCCHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHEEHHHHHHHHHH TVEQAVANMEKEMKAAMNK HHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; maltose [Periplasm]; H2O [C]
Specific reaction: ATP + maltose [Periplasm] + H2O = ADP + phosphate + maltose [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10567266 [H]