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The map label for this gene is yurM [H]

Identifier: 138895664

GI number: 138895664

Start: 2138677

End: 2139504

Strand: Reverse

Name: yurM [H]

Synonym: GTNG_2020

Alternate gene names: 138895664

Gene position: 2139504-2138677 (Counterclockwise)

Preceding gene: 138895665

Following gene: 138895663

Centisome position: 60.26

GC content: 44.08

Gene sequence:

>828_bases
ATGACGAAAAAAGCAGGACCTCTTTTTTATATCTTTCTCGTCGTATTCGTCTTTTTTGTCATGTTTCCGTTTTTATGGGT
GTTGCTCAGCTCGATAAAGCCGCTTAGTGAACTATTCGGCGATAAAGCATTTCAATGGTTTACTAGCCACCCAACATTAA
AATCGTATATTTCCGTCTTTGTCAATTATCCATTTTTGCGCTATTTATGGAACAGCACGGTGGTTGCGACGATCACGACG
GTTTATACCGTATTTGTCGCGGCATTTGCCGCTTACGCCATCGCGCGTTTAGAGTTCAGAGGCAAAACCGTCATTCTCGG
TCTCGTGTTGGCGGTGTCCATGTTTCCGCAAATTGCAACCATTTCTCCGATTTACATGTTTGTGAAAAAGTTTGGTTTAA
CAAATAGTTATTTAGGATTGATTATTCCGTATACAACGTTTGCCCTTCCGTTATCGATTTGGCTGTTGGTCACCTTTTTC
CGCAAAATTCCATTTGATTTGGAAGAAGCGGCAAAAATCGATGGAGCAACGCCAATGCAAACGTATTTCAAGGTCATTTT
ACCGCTCGCGGTGCCGGGGGTGTTTACGACCTCGATTCTCGTTTTTATCGCAGCATGGAATGAATTTTTATTTGCCTTAA
CGATTAATACGGCGGAAAAATACAAAACAGTACCCGTTGGTATCGCCATGTTCCAGGGACAGTACACGATCCCGTGGGGC
GAAATCTCGGCGGCGACGGTTATTGTCACGATTCCGCTTGTCATTATGGTATTGCTGTTCCAACGCCGCATCGTATCCGG
TCTCACGTCTGGCTCGGTGAAAGAATAA

Upstream 100 bases:

>100_bases
TTTATTTGTGTCGCCATCATTTCAATGATTTATATTAAGTGGCTCGGTAAAGATTTATTGTCCGACAGTGCGAGTGCGAA
ACGATAAGGGAGGTGAGATC

Downstream 100 bases:

>100_bases
TCGCTAAGGCAAAGGAGAGGGCGTCCCAAATGCAATGGGGCGCCCTCTCATTATATATGCCTCCGACGTTTCCTCAAGGC
CATATCTTCTCTCTGGCACC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MTKKAGPLFYIFLVVFVFFVMFPFLWVLLSSIKPLSELFGDKAFQWFTSHPTLKSYISVFVNYPFLRYLWNSTVVATITT
VYTVFVAAFAAYAIARLEFRGKTVILGLVLAVSMFPQIATISPIYMFVKKFGLTNSYLGLIIPYTTFALPLSIWLLVTFF
RKIPFDLEEAAKIDGATPMQTYFKVILPLAVPGVFTTSILVFIAAWNEFLFALTINTAEKYKTVPVGIAMFQGQYTIPWG
EISAATVIVTIPLVIMVLLFQRRIVSGLTSGSVKE

Sequences:

>Translated_275_residues
MTKKAGPLFYIFLVVFVFFVMFPFLWVLLSSIKPLSELFGDKAFQWFTSHPTLKSYISVFVNYPFLRYLWNSTVVATITT
VYTVFVAAFAAYAIARLEFRGKTVILGLVLAVSMFPQIATISPIYMFVKKFGLTNSYLGLIIPYTTFALPLSIWLLVTFF
RKIPFDLEEAAKIDGATPMQTYFKVILPLAVPGVFTTSILVFIAAWNEFLFALTINTAEKYKTVPVGIAMFQGQYTIPWG
EISAATVIVTIPLVIMVLLFQRRIVSGLTSGSVKE
>Mature_274_residues
TKKAGPLFYIFLVVFVFFVMFPFLWVLLSSIKPLSELFGDKAFQWFTSHPTLKSYISVFVNYPFLRYLWNSTVVATITTV
YTVFVAAFAAYAIARLEFRGKTVILGLVLAVSMFPQIATISPIYMFVKKFGLTNSYLGLIIPYTTFALPLSIWLLVTFFR
KIPFDLEEAAKIDGATPMQTYFKVILPLAVPGVFTTSILVFIAAWNEFLFALTINTAEKYKTVPVGIAMFQGQYTIPWGE
ISAATVIVTIPLVIMVLLFQRRIVSGLTSGSVKE

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787571, Length=275, Percent_Identity=33.4545454545455, Blast_Score=146, Evalue=2e-36,
Organism=Escherichia coli, GI1790464, Length=219, Percent_Identity=36.986301369863, Blast_Score=124, Evalue=6e-30,
Organism=Escherichia coli, GI1789860, Length=211, Percent_Identity=30.8056872037915, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1787368, Length=229, Percent_Identity=27.0742358078603, Blast_Score=63, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30929; Mature: 30798

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TKKAGPLFYIFLVVFVFFVMFPFLWVLLSSIKPLSELFGDKAFQWFTSHPTLKSYISVF
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCHHHHHHCCCCCHHHHHHHH
VNYPFLRYLWNSTVVATITTVYTVFVAAFAAYAIARLEFRGKTVILGLVLAVSMFPQIAT
HCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
ISPIYMFVKKFGLTNSYLGLIIPYTTFALPLSIWLLVTFFRKIPFDLEEAAKIDGATPMQ
HHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHH
TYFKVILPLAVPGVFTTSILVFIAAWNEFLFALTINTAEKYKTVPVGIAMFQGQYTIPWG
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCHHHEEECCCEECCCC
EISAATVIVTIPLVIMVLLFQRRIVSGLTSGSVKE
CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]