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The map label for this gene is dppC [H]

Identifier: 138895641

GI number: 138895641

Start: 2111344

End: 2112246

Strand: Reverse

Name: dppC [H]

Synonym: GTNG_1997

Alternate gene names: 138895641

Gene position: 2112246-2111344 (Counterclockwise)

Preceding gene: 138895642

Following gene: 138895640

Centisome position: 59.49

GC content: 40.2

Gene sequence:

>903_bases
ATGGAAATAAATACTAAAGGAGTAGAACATATTGGAAGTGAATTGAAAAGCGAGAAGTTCGAGTTGCTTTTTAGGCGCTT
CTTATTTAATAAATTAGCAGTGGTAGGAACGGTCATTGTCATCTTACTGTGTTTGTTTTCTACCGTCGGGCCATTCATGA
CGAAATATGGCCCGCTCGATATAGATCCGATGAATCGCTTGCAACCACCTAGTGCTGATCACTGGTTTGGTACAGATAAT
TTCGGTCGGGATCTATTCAGTCGAGTGGTTCATGGAGGACGAGTATCTCTAGTAGTTGGTTTTTCAGCTGCACTATTAAC
CGCCATTATTGGGATGATCATAGGGCTGTATTCAAGCTATTATCGTATTTTAGATCATGTGTTAATGAGGATTTGTGACG
GATTGATCGCTTTCCCGGATATTCTTTTAGCTATAGCGATTACCGCTATACTTGGCCCTAATCCATTTAATGTAGTTATC
GCCATTACCATTGTAAAAGTGCCGGCAATGGCCCGGATTGTCCGTTCTGCGGCTTTAGTGGTAAAAGAACAAACTTACAT
AGAGGCCTTAAAAGCTCAAGGGGCAAGTTCTTGGAGAATTATTTGGGTTCATATGGCTCCAAATACGATATCGCCTTTCT
TAGTACAGATGACATATGTTTTTGCTCTCTCGATTATTCTTGAGGCAGGATTAAGTTTTCTTGGTGCTGGAGTCCCGGCT
CCGAATCCTAGTTGGGGAAATATTCTTTACGATGGAAAAGCAGTGATTTTTCGTGCTTGGTGGATGACACTGTTCCCGAG
TATTTTTATTACCTTAGCGGTTTTAGGATTAAATTTGTTGGGGGATGGATTAAGAGATTTATTAGATCCCCATACAAGTA
AAGCGAATAAAAAATTAAAGTAA

Upstream 100 bases:

>100_bases
AACAAAATGGAAAAAAGGACCTATTATAAAGGGTGTTTTTGTCAAATAGCTTTTATGGTTATCGTCTATATAAAGAGGTG
AAGGACAATTGGAATCTAAA

Downstream 100 bases:

>100_bases
AACAAGGAAAGGTGCCGGATAACATGGCGAACAGCAACTTATTGGAAATAAAAGATTTAAAAACTTCTTTTTTAACAGAG
CGTGGTTTAGTTACGGCTGT

Product: oligopeptide ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 300; Mature: 300

Protein sequence:

>300_residues
MEINTKGVEHIGSELKSEKFELLFRRFLFNKLAVVGTVIVILLCLFSTVGPFMTKYGPLDIDPMNRLQPPSADHWFGTDN
FGRDLFSRVVHGGRVSLVVGFSAALLTAIIGMIIGLYSSYYRILDHVLMRICDGLIAFPDILLAIAITAILGPNPFNVVI
AITIVKVPAMARIVRSAALVVKEQTYIEALKAQGASSWRIIWVHMAPNTISPFLVQMTYVFALSIILEAGLSFLGAGVPA
PNPSWGNILYDGKAVIFRAWWMTLFPSIFITLAVLGLNLLGDGLRDLLDPHTSKANKKLK

Sequences:

>Translated_300_residues
MEINTKGVEHIGSELKSEKFELLFRRFLFNKLAVVGTVIVILLCLFSTVGPFMTKYGPLDIDPMNRLQPPSADHWFGTDN
FGRDLFSRVVHGGRVSLVVGFSAALLTAIIGMIIGLYSSYYRILDHVLMRICDGLIAFPDILLAIAITAILGPNPFNVVI
AITIVKVPAMARIVRSAALVVKEQTYIEALKAQGASSWRIIWVHMAPNTISPFLVQMTYVFALSIILEAGLSFLGAGVPA
PNPSWGNILYDGKAVIFRAWWMTLFPSIFITLAVLGLNLLGDGLRDLLDPHTSKANKKLK
>Mature_300_residues
MEINTKGVEHIGSELKSEKFELLFRRFLFNKLAVVGTVIVILLCLFSTVGPFMTKYGPLDIDPMNRLQPPSADHWFGTDN
FGRDLFSRVVHGGRVSLVVGFSAALLTAIIGMIIGLYSSYYRILDHVLMRICDGLIAFPDILLAIAITAILGPNPFNVVI
AITIVKVPAMARIVRSAALVVKEQTYIEALKAQGASSWRIIWVHMAPNTISPFLVQMTYVFALSIILEAGLSFLGAGVPA
PNPSWGNILYDGKAVIFRAWWMTLFPSIFITLAVLGLNLLGDGLRDLLDPHTSKANKKLK

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=272, Percent_Identity=43.75, Blast_Score=210, Evalue=9e-56,
Organism=Escherichia coli, GI1787760, Length=264, Percent_Identity=39.3939393939394, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=37.3239436619718, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787498, Length=294, Percent_Identity=35.3741496598639, Blast_Score=152, Evalue=3e-38,
Organism=Escherichia coli, GI1789889, Length=240, Percent_Identity=35, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787549, Length=272, Percent_Identity=31.25, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI1788505, Length=229, Percent_Identity=31.4410480349345, Blast_Score=105, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32999; Mature: 32999

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEINTKGVEHIGSELKSEKFELLFRRFLFNKLAVVGTVIVILLCLFSTVGPFMTKYGPLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IDPMNRLQPPSADHWFGTDNFGRDLFSRVVHGGRVSLVVGFSAALLTAIIGMIIGLYSSY
CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
YRILDHVLMRICDGLIAFPDILLAIAITAILGPNPFNVVIAITIVKVPAMARIVRSAALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHH
VKEQTYIEALKAQGASSWRIIWVHMAPNTISPFLVQMTYVFALSIILEAGLSFLGAGVPA
HHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PNPSWGNILYDGKAVIFRAWWMTLFPSIFITLAVLGLNLLGDGLRDLLDPHTSKANKKLK
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MEINTKGVEHIGSELKSEKFELLFRRFLFNKLAVVGTVIVILLCLFSTVGPFMTKYGPLD
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
IDPMNRLQPPSADHWFGTDNFGRDLFSRVVHGGRVSLVVGFSAALLTAIIGMIIGLYSSY
CCCHHCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHH
YRILDHVLMRICDGLIAFPDILLAIAITAILGPNPFNVVIAITIVKVPAMARIVRSAALV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHEEHHHHHHHHHHHHHHHHHHHH
VKEQTYIEALKAQGASSWRIIWVHMAPNTISPFLVQMTYVFALSIILEAGLSFLGAGVPA
HHHHHHHHHHHHCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PNPSWGNILYDGKAVIFRAWWMTLFPSIFITLAVLGLNLLGDGLRDLLDPHTSKANKKLK
CCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]