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The map label for this gene is 138895622

Identifier: 138895622

GI number: 138895622

Start: 2096506

End: 2097624

Strand: Direct

Name: 138895622

Synonym: GTNG_1975

Alternate gene names: NA

Gene position: 2096506-2097624 (Clockwise)

Preceding gene: 138895621

Following gene: 138895623

Centisome position: 59.05

GC content: 50.76

Gene sequence:

>1119_bases
ATGAATGATTTTCACCCGTTCGGTTGGTATGCGGCGAAAATTGCCCCGCATTTGCCGAAAAAAGCGTTTCAACCTGTGAA
GTCCCGTTTGTTTGGAGGGTTGGCTTATTTCTTATTGGTTACTGGCGGCATCCTCGCTGTGTCACTTCTGTCTCTTCATC
CAATATGGAACCTCCTCATTTCTGTTGTGCTCGGTTTCAGTTTTGCCGCATTAGGATTTTTAGGCCATGAAATATTGCAC
GGCACGGTCGTCAAAACGCCGTGGTTGCGCGATCTGCTCGGGGCGATCGCCTTTTGGCCGCTCTGCACCGGGCCGAAGCT
ATGGCGAAAATGGCATAACGCCACCCACCATGTGCATACCCAACATGAAGAAAAAGACCCTGACGCTTGGCCAAGTATGG
AACAATTGGTGAAAAGCCGTCTGTTGCGCTGGGTATACCGCATTCCATTCCCGATCCGCGCCTTTTTCGCGTTCAGCTCC
TTGTCGGTAATGTTTACCGTTCACTCGATTCGGATGTTGTTTTCCTTTTTCCGAGATTTTCGTTGGAAAAACCGCACCGT
TGTCCTGCTTCAATTTTTCTTGCCATGGACGACTTGGCTTGGGTTGCTATGGCTGATCGGCTGGGAAAAGTGGTGGTTCG
CGTTTTTACTTCCGCTGCTGATCGCCAACATGATCGTCATGGGCTACATCTCGACCAATCACCGTCTCAATCCGTTAGTG
CCGGTCAACGACCCGTTGGCGAACAGCTTATCCGTCACCGTACCGAAGTGGGTGGATGTTCTCCACTTCAATTTCTCGTA
TCATACCGAGCATCATCTTTTTCCGGCGATGAGCTCGAAGTATTATCCACTCGTGAAAGAACATATCAAACAAATGTGGC
CGGACCGCTACCATGAAATGCCGATGAAAAAAGCGTTGGCCGCGCTTTGGAAAACGCCGCGCATCTACTACGAACATAGC
GAGCTCATCGAGCCGAAGCAAGGTCATGTGTACGGCACCCTCGGCAACGGACTCGACCCAAACGAGATTGTGCACCGCGA
GTTGAAACAAGACGCTCAAGCACTGCCAACGATGCGGCAGGAAGAATGGAAAAAAGCGTCCGGAGTGGAGAAAGTGTAA

Upstream 100 bases:

>100_bases
GCTTTTTTGATCACCTCATTCAATCTTCGCGTGGCGAAAACGCGGGCAGATTTTCACCACAGCGTGTCACGTGAAGAGTA
GTTTGGAAGGAGACTCATAA

Downstream 100 bases:

>100_bases
ATACGCCCTGCCATCCTTGGTTCAATTCCCCTTGCAAGGAGTCTCGCTGCAAAAGAAATCGGCAGCAAGCTCAAGCCTAT
CTGTACAGAAGAAGGTGTCC

Product: Fatty acid desaturase

Products: NA

Alternate protein names: Fatty Acid Desaturase Domain Protein

Number of amino acids: Translated: 372; Mature: 372

Protein sequence:

>372_residues
MNDFHPFGWYAAKIAPHLPKKAFQPVKSRLFGGLAYFLLVTGGILAVSLLSLHPIWNLLISVVLGFSFAALGFLGHEILH
GTVVKTPWLRDLLGAIAFWPLCTGPKLWRKWHNATHHVHTQHEEKDPDAWPSMEQLVKSRLLRWVYRIPFPIRAFFAFSS
LSVMFTVHSIRMLFSFFRDFRWKNRTVVLLQFFLPWTTWLGLLWLIGWEKWWFAFLLPLLIANMIVMGYISTNHRLNPLV
PVNDPLANSLSVTVPKWVDVLHFNFSYHTEHHLFPAMSSKYYPLVKEHIKQMWPDRYHEMPMKKALAALWKTPRIYYEHS
ELIEPKQGHVYGTLGNGLDPNEIVHRELKQDAQALPTMRQEEWKKASGVEKV

Sequences:

>Translated_372_residues
MNDFHPFGWYAAKIAPHLPKKAFQPVKSRLFGGLAYFLLVTGGILAVSLLSLHPIWNLLISVVLGFSFAALGFLGHEILH
GTVVKTPWLRDLLGAIAFWPLCTGPKLWRKWHNATHHVHTQHEEKDPDAWPSMEQLVKSRLLRWVYRIPFPIRAFFAFSS
LSVMFTVHSIRMLFSFFRDFRWKNRTVVLLQFFLPWTTWLGLLWLIGWEKWWFAFLLPLLIANMIVMGYISTNHRLNPLV
PVNDPLANSLSVTVPKWVDVLHFNFSYHTEHHLFPAMSSKYYPLVKEHIKQMWPDRYHEMPMKKALAALWKTPRIYYEHS
ELIEPKQGHVYGTLGNGLDPNEIVHRELKQDAQALPTMRQEEWKKASGVEKV
>Mature_372_residues
MNDFHPFGWYAAKIAPHLPKKAFQPVKSRLFGGLAYFLLVTGGILAVSLLSLHPIWNLLISVVLGFSFAALGFLGHEILH
GTVVKTPWLRDLLGAIAFWPLCTGPKLWRKWHNATHHVHTQHEEKDPDAWPSMEQLVKSRLLRWVYRIPFPIRAFFAFSS
LSVMFTVHSIRMLFSFFRDFRWKNRTVVLLQFFLPWTTWLGLLWLIGWEKWWFAFLLPLLIANMIVMGYISTNHRLNPLV
PVNDPLANSLSVTVPKWVDVLHFNFSYHTEHHLFPAMSSKYYPLVKEHIKQMWPDRYHEMPMKKALAALWKTPRIYYEHS
ELIEPKQGHVYGTLGNGLDPNEIVHRELKQDAQALPTMRQEEWKKASGVEKV

Specific function: Unknown

COG id: COG3239

COG function: function code I; Fatty acid desaturase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43477; Mature: 43477

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHCCCCCC
>Mature Secondary Structure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HHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA