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The map label for this gene is yiaO [C]

Identifier: 138895593

GI number: 138895593

Start: 2069877

End: 2070782

Strand: Reverse

Name: yiaO [C]

Synonym: GTNG_1946

Alternate gene names: 138895593

Gene position: 2070782-2069877 (Counterclockwise)

Preceding gene: 138895594

Following gene: 138895592

Centisome position: 58.33

GC content: 42.16

Gene sequence:

>906_bases
ATGAAGATGGCCGTTGCGACATCGAAAGACCGTTCACTGACAAAGGGATTGTACAAGTTTGCTGAAATCGTAGAAAAAGA
GACAAACGGATCGATTAAAGTGGAAGTGTACCCGGACGGGCAGCTTGGGGGAGATTTAGCCGTATTTGAAGCGCTGAAGA
TGGGAACGATTCAAGGATCGACGATGTCGACAGGTCCGATCGCTTCCTTTGCACCACGCATTGGAGTGTTAGATCTTCCC
TTTTTATTCAAAGATCAAGAAACCGCTTATAAAGTGCTGGATGGAAAAATTGGACAAGAATTGCTAAACGATTTGCCTGC
TGTTGGAGTGATTGGTCTGAACTATTGGGAAAACGGGTTCCGCCATTTAACGAACAATGTGCGGGAAGTAAAAAGTGTAG
AAGATATTCAAGGGTTGAAAATTCGGACGTTAGAAAATGATCTTCATATTGATTTGTGGAAAGAATTAGGAGCTACTCCA
GTTCCGATGGCCTTTACGGAGCTGTTTACCGCTTTAGAGCAACGGGTTGTTGACGGCCAAGAAAACCCGGTTGGAAATGT
CGCGATCAACAAGTTTCACGAAGTACAAAAATATTTGACGAAGACCGAGCATGTGTACAATGCGAGCCCACTGCTTATCA
GCAAAAAGTTTTGGGATACGTTGACGGACAAAGAAAAAGATGTGATCACGAAAGCGGCGGAAGAAGCAAGAGATTACCAG
CGTCAATTGAATAAAGAAGAAGACGACAAAATGTTCGATTATTTAAAACAGCAAGGAATGGTCATTACCGAACTATCTGA
AACAGAAAAACAAAAATTTATTGACAAAGTGCAACTGGTCTATAAAAAATATGCGCCGAAGTTCGGCGAAGATTTAGTGA
ACCAACTGCTTGAAGCAGGAAAATAA

Upstream 100 bases:

>100_bases
TGGCGTTGTTGGTGGTCTTCCTGTTGGTTCTTGCGGGGTGCTCATCAAAATCGGAGACACAAGGGGGGCGGCGCGGCGAA
AAAAAACAGAACCAAAAGTC

Downstream 100 bases:

>100_bases
CAGAATGGCACAACGACTCTTGAGGAGAAATGCCCCTTAAGAGTCATTCCATTCTTTGATGACAGACTTAGGGGAGGAAC
ACAATGAAAAGGATCGGAGC

Product: ABC transporter periplasmic solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 301; Mature: 301

Protein sequence:

>301_residues
MKMAVATSKDRSLTKGLYKFAEIVEKETNGSIKVEVYPDGQLGGDLAVFEALKMGTIQGSTMSTGPIASFAPRIGVLDLP
FLFKDQETAYKVLDGKIGQELLNDLPAVGVIGLNYWENGFRHLTNNVREVKSVEDIQGLKIRTLENDLHIDLWKELGATP
VPMAFTELFTALEQRVVDGQENPVGNVAINKFHEVQKYLTKTEHVYNASPLLISKKFWDTLTDKEKDVITKAAEEARDYQ
RQLNKEEDDKMFDYLKQQGMVITELSETEKQKFIDKVQLVYKKYAPKFGEDLVNQLLEAGK

Sequences:

>Translated_301_residues
MKMAVATSKDRSLTKGLYKFAEIVEKETNGSIKVEVYPDGQLGGDLAVFEALKMGTIQGSTMSTGPIASFAPRIGVLDLP
FLFKDQETAYKVLDGKIGQELLNDLPAVGVIGLNYWENGFRHLTNNVREVKSVEDIQGLKIRTLENDLHIDLWKELGATP
VPMAFTELFTALEQRVVDGQENPVGNVAINKFHEVQKYLTKTEHVYNASPLLISKKFWDTLTDKEKDVITKAAEEARDYQ
RQLNKEEDDKMFDYLKQQGMVITELSETEKQKFIDKVQLVYKKYAPKFGEDLVNQLLEAGK
>Mature_301_residues
MKMAVATSKDRSLTKGLYKFAEIVEKETNGSIKVEVYPDGQLGGDLAVFEALKMGTIQGSTMSTGPIASFAPRIGVLDLP
FLFKDQETAYKVLDGKIGQELLNDLPAVGVIGLNYWENGFRHLTNNVREVKSVEDIQGLKIRTLENDLHIDLWKELGATP
VPMAFTELFTALEQRVVDGQENPVGNVAINKFHEVQKYLTKTEHVYNASPLLISKKFWDTLTDKEKDVITKAAEEARDYQ
RQLNKEEDDKMFDYLKQQGMVITELSETEKQKFIDKVQLVYKKYAPKFGEDLVNQLLEAGK

Specific function: Unknown

COG id: COG1638

COG function: function code G; TRAP-type C4-dicarboxylate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 7 family [H]

Homologues:

Organism=Escherichia coli, GI1790004, Length=298, Percent_Identity=36.5771812080537, Blast_Score=198, Evalue=4e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018389
- InterPro:   IPR004682 [H]

Pfam domain/function: PF03480 SBP_bac_7 [H]

EC number: NA

Molecular weight: Translated: 34014; Mature: 34014

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMAVATSKDRSLTKGLYKFAEIVEKETNGSIKVEVYPDGQLGGDLAVFEALKMGTIQGS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC
TMSTGPIASFAPRIGVLDLPFLFKDQETAYKVLDGKIGQELLNDLPAVGVIGLNYWENGF
CCCCCCHHHHCCCCCCEECCHHCCCHHHHHHHHCCHHHHHHHHCCCCCEEEECHHHHHHH
RHLTNNVREVKSVEDIQGLKIRTLENDLHIDLWKELGATPVPMAFTELFTALEQRVVDGQ
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
ENPVGNVAINKFHEVQKYLTKTEHVYNASPLLISKKFWDTLTDKEKDVITKAAEEARDYQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHH
RQLNKEEDDKMFDYLKQQGMVITELSETEKQKFIDKVQLVYKKYAPKFGEDLVNQLLEAG
HHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
K
C
>Mature Secondary Structure
MKMAVATSKDRSLTKGLYKFAEIVEKETNGSIKVEVYPDGQLGGDLAVFEALKMGTIQGS
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCC
TMSTGPIASFAPRIGVLDLPFLFKDQETAYKVLDGKIGQELLNDLPAVGVIGLNYWENGF
CCCCCCHHHHCCCCCCEECCHHCCCHHHHHHHHCCHHHHHHHHCCCCCEEEECHHHHHHH
RHLTNNVREVKSVEDIQGLKIRTLENDLHIDLWKELGATPVPMAFTELFTALEQRVVDGQ
HHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCC
ENPVGNVAINKFHEVQKYLTKTEHVYNASPLLISKKFWDTLTDKEKDVITKAAEEARDYQ
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHH
RQLNKEEDDKMFDYLKQQGMVITELSETEKQKFIDKVQLVYKKYAPKFGEDLVNQLLEAG
HHCCCCCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800; 10675023 [H]