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The map label for this gene is yurN [H]

Identifier: 138895474

GI number: 138895474

Start: 1937578

End: 1938552

Strand: Reverse

Name: yurN [H]

Synonym: GTNG_1822

Alternate gene names: 138895474

Gene position: 1938552-1937578 (Counterclockwise)

Preceding gene: 138895475

Following gene: 138895473

Centisome position: 54.6

GC content: 38.87

Gene sequence:

>975_bases
ATGATCACTTTTACACCACTTTTTTGGAAGGAGAATGCTATGAATGTTGATGCCCAAAAAAATATTCATGGAAACGTGCA
ACGTGTCTCGTATCCCCGAAATAGAAAGGATCACCGCTTGATATTAAGATCGATTTTATTCTTATTTCCTGCCTGTTCCC
TCTTATTGGTTTTCTTTGTAGGTCCGATTTTACTAACTTTCTATTTTGCCTTTACCAACATGTCGCTTACCGGTACAGCT
GCCCAAGCGATAGAGTTTGTCGGTTTTAAAAACTTTATGTATATGTTTTCAGACCCTAACTTTCGAGTCAGTATTGTGAA
AACGATCGTTTTCCTTGTGTTTTCTGCTGTGATTGGGCAACAAGTTTTAGGATTTATACTAGCGTTGTTAATGAAAGAAA
GAAATCGTACATTTCGGCGTATTATAGGAACTACCGTGCTTGCAGGGTGGGTTACCCCGGAAATTGTGGTCGCATTTGCG
TTTTTTGCTTTTTTGAATGAACAAGGCACATTAAATACTATCCTTCAATCGATAGGGATAAAACCAATTGCATGGTTATT
TACGTTTCCCATGGTTAGTGTAATCATCGCTAATATTTGGCATGGAACTGCATTTTCGATGTTAGTGTTCCAATCTGCTC
TTGACAATGTTCCTAAATCGCTAGAAGAAGCTGCGATTATTGATGGTGCAACAAGGTGGCAACGGTTGTGGAGAATCACT
ATTCCTGTGATTAAGGGACAAATTGTGACAAACATGGTTCTCGTTACATTACAAACGTTAGGGGTGTTTACATTAATTTA
TGCCTTAACGGGTGGAGGACCAGGAATGTCCACTCAAACGCTTCCGATTTATATGTACAACCAAGCTTTTGTGAACTACC
AGTTAGGGTACGGAACTGCTATTTCATTGGCTATGCTGATCATCGGAATCATTGCAAGCTTACTGTATATTCGTCTGTTA
AAAGTGAAAGTGTAA

Upstream 100 bases:

>100_bases
ATGGAGCAATACGCCAGAGAGGTTACGCGTGTAGTAGGTAAGGAAAATGTAGAAGTGCGGAAATAGAGGAGAATAGATAA
AAGGTGATCATCGTTATAAG

Downstream 100 bases:

>100_bases
GGGAAAGAGGTGGGAACAAGGATGACTAGGCGTACGTTGGAGAAGGTGATTCCGTACATTGTGCTTAGCTTTTTGGGAGT
AGTATTTTTGTTGCCCTTGC

Product: putative integral membrane transport protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MITFTPLFWKENAMNVDAQKNIHGNVQRVSYPRNRKDHRLILRSILFLFPACSLLLVFFVGPILLTFYFAFTNMSLTGTA
AQAIEFVGFKNFMYMFSDPNFRVSIVKTIVFLVFSAVIGQQVLGFILALLMKERNRTFRRIIGTTVLAGWVTPEIVVAFA
FFAFLNEQGTLNTILQSIGIKPIAWLFTFPMVSVIIANIWHGTAFSMLVFQSALDNVPKSLEEAAIIDGATRWQRLWRIT
IPVIKGQIVTNMVLVTLQTLGVFTLIYALTGGGPGMSTQTLPIYMYNQAFVNYQLGYGTAISLAMLIIGIIASLLYIRLL
KVKV

Sequences:

>Translated_324_residues
MITFTPLFWKENAMNVDAQKNIHGNVQRVSYPRNRKDHRLILRSILFLFPACSLLLVFFVGPILLTFYFAFTNMSLTGTA
AQAIEFVGFKNFMYMFSDPNFRVSIVKTIVFLVFSAVIGQQVLGFILALLMKERNRTFRRIIGTTVLAGWVTPEIVVAFA
FFAFLNEQGTLNTILQSIGIKPIAWLFTFPMVSVIIANIWHGTAFSMLVFQSALDNVPKSLEEAAIIDGATRWQRLWRIT
IPVIKGQIVTNMVLVTLQTLGVFTLIYALTGGGPGMSTQTLPIYMYNQAFVNYQLGYGTAISLAMLIIGIIASLLYIRLL
KVKV
>Mature_324_residues
MITFTPLFWKENAMNVDAQKNIHGNVQRVSYPRNRKDHRLILRSILFLFPACSLLLVFFVGPILLTFYFAFTNMSLTGTA
AQAIEFVGFKNFMYMFSDPNFRVSIVKTIVFLVFSAVIGQQVLGFILALLMKERNRTFRRIIGTTVLAGWVTPEIVVAFA
FFAFLNEQGTLNTILQSIGIKPIAWLFTFPMVSVIIANIWHGTAFSMLVFQSALDNVPKSLEEAAIIDGATRWQRLWRIT
IPVIKGQIVTNMVLVTLQTLGVFTLIYALTGGGPGMSTQTLPIYMYNQAFVNYQLGYGTAISLAMLIIGIIASLLYIRLL
KVKV

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=241, Percent_Identity=32.3651452282158, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789861, Length=302, Percent_Identity=28.1456953642384, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1790465, Length=257, Percent_Identity=26.8482490272374, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 36407; Mature: 36407

Theoretical pI: Translated: 10.58; Mature: 10.58

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFTPLFWKENAMNVDAQKNIHGNVQRVSYPRNRKDHRLILRSILFLFPACSLLLVFFV
CCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GPILLTFYFAFTNMSLTGTAAQAIEFVGFKNFMYMFSDPNFRVSIVKTIVFLVFSAVIGQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
QVLGFILALLMKERNRTFRRIIGTTVLAGWVTPEIVVAFAFFAFLNEQGTLNTILQSIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
KPIAWLFTFPMVSVIIANIWHGTAFSMLVFQSALDNVPKSLEEAAIIDGATRWQRLWRIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IPVIKGQIVTNMVLVTLQTLGVFTLIYALTGGGPGMSTQTLPIYMYNQAFVNYQLGYGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCHH
ISLAMLIIGIIASLLYIRLLKVKV
HHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MITFTPLFWKENAMNVDAQKNIHGNVQRVSYPRNRKDHRLILRSILFLFPACSLLLVFFV
CCEECCCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
GPILLTFYFAFTNMSLTGTAAQAIEFVGFKNFMYMFSDPNFRVSIVKTIVFLVFSAVIGQ
HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHH
QVLGFILALLMKERNRTFRRIIGTTVLAGWVTPEIVVAFAFFAFLNEQGTLNTILQSIGI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCHHHHHHHHHCC
KPIAWLFTFPMVSVIIANIWHGTAFSMLVFQSALDNVPKSLEEAAIIDGATRWQRLWRIT
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
IPVIKGQIVTNMVLVTLQTLGVFTLIYALTGGGPGMSTQTLPIYMYNQAFVNYQLGYGTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCEEEEEECCCCHH
ISLAMLIIGIIASLLYIRLLKVKV
HHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]