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The map label for this gene is ykkB [H]

Identifier: 138895243

GI number: 138895243

Start: 1671106

End: 1671618

Strand: Direct

Name: ykkB [H]

Synonym: GTNG_1583

Alternate gene names: 138895243

Gene position: 1671106-1671618 (Clockwise)

Preceding gene: 138895242

Following gene: 138895245

Centisome position: 47.07

GC content: 37.23

Gene sequence:

>513_bases
ATGATTGTGCTTGAAACACAAAGGTTGATATTAAGGCAGTATGAGGATGAAGATATTACTCCTCTACATCATATTTTTTC
TGACTCAGAGACCATGAGGTTTTATCCAGCTCCTTTTAGTATTGAGCAAACTCAAGACTGGATTAAACGAAATCAAGATC
GATATCGGAATGATGGCTATGGATTATGGGCGGTTTGTTTGAAGGAAACGAATGAATTGATCGGTGATTGTGGTCTTGTG
AAACAAAAAATAAATGACAGTATTGAAGTGGAGATTGGGTATCACATCAATAAAACGTATTGGTCAAAGGGATTCGCAAC
AGAAGCGGCCAAAGTGTGCAAGGAATATGCGTTTTACAAATTGGGCTTAAGTAAGCTGATCAGTATTATTGATCCAGGAA
ATGTTCCATCCATTCGTGTGGCGGAGAAGATAGGTTTCACTAAGGAAAAAGAAGTATTTATTTTCGGTAAGAACCATTAT
ATATATTCAGGGGTTAAAGAGAAGGAGGATTGA

Upstream 100 bases:

>100_bases
ATGACTTGAAATGCGACATGGGTGGATAAACGAGCAGAAAGGTTGAAGGAGCAAGTAATTCATTTTTAGCTAAAACGGTT
AAACAAAAGGGGATGGGGAA

Downstream 100 bases:

>100_bases
ACTGAGGCTCCACTATTATTTATATATTAATTTCATAATGATTAGGAGGTTTATATGGACAGTGATGCTCTCGTTTACTT
CGTCTTGGGGGCATCCTTTT

Product: hypothetical protein

Products: Coenzyme A; H+; N8-Acetylspermidine [C]

Alternate protein names: NA

Number of amino acids: Translated: 170; Mature: 170

Protein sequence:

>170_residues
MIVLETQRLILRQYEDEDITPLHHIFSDSETMRFYPAPFSIEQTQDWIKRNQDRYRNDGYGLWAVCLKETNELIGDCGLV
KQKINDSIEVEIGYHINKTYWSKGFATEAAKVCKEYAFYKLGLSKLISIIDPGNVPSIRVAEKIGFTKEKEVFIFGKNHY
IYSGVKEKED

Sequences:

>Translated_170_residues
MIVLETQRLILRQYEDEDITPLHHIFSDSETMRFYPAPFSIEQTQDWIKRNQDRYRNDGYGLWAVCLKETNELIGDCGLV
KQKINDSIEVEIGYHINKTYWSKGFATEAAKVCKEYAFYKLGLSKLISIIDPGNVPSIRVAEKIGFTKEKEVFIFGKNHY
IYSGVKEKED
>Mature_170_residues
MIVLETQRLILRQYEDEDITPLHHIFSDSETMRFYPAPFSIEQTQDWIKRNQDRYRNDGYGLWAVCLKETNELIGDCGLV
KQKINDSIEVEIGYHINKTYWSKGFATEAAKVCKEYAFYKLGLSKLISIIDPGNVPSIRVAEKIGFTKEKEVFIFGKNHY
IYSGVKEKED

Specific function: Regulates Polyamine Concentration By Their Degradation. Acts On Spermidine, Forming N(1)- And N(8)-Acetylspermidine. [C]

COG id: COG1670

COG function: function code J; Acetyltransferases, including N-acetylases of ribosomal proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: 2.3.1.57 [C]

Molecular weight: Translated: 19812; Mature: 19812

Theoretical pI: Translated: 6.13; Mature: 6.13

Prosite motif: PS01346 CLAUDIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIVLETQRLILRQYEDEDITPLHHIFSDSETMRFYPAPFSIEQTQDWIKRNQDRYRNDGY
CEEECHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCCC
GLWAVCLKETNELIGDCGLVKQKINDSIEVEIGYHINKTYWSKGFATEAAKVCKEYAFYK
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHH
LGLSKLISIIDPGNVPSIRVAEKIGFTKEKEVFIFGKNHYIYSGVKEKED
HCHHHHHHHCCCCCCCCEEEHHHCCCCCCCEEEEEECCCEEECCCCCCCC
>Mature Secondary Structure
MIVLETQRLILRQYEDEDITPLHHIFSDSETMRFYPAPFSIEQTQDWIKRNQDRYRNDGY
CEEECHHHHHHHHCCCCCCCHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCHHHHCCCCC
GLWAVCLKETNELIGDCGLVKQKINDSIEVEIGYHINKTYWSKGFATEAAKVCKEYAFYK
CHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCHHHCCCCHHHHHHHHHHHHHHH
LGLSKLISIIDPGNVPSIRVAEKIGFTKEKEVFIFGKNHYIYSGVKEKED
HCHHHHHHHCCCCCCCCEEEHHHCCCCCCCEEEEEECCCEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Acetyl-CoA; Spermidine [C]

Specific reaction: Acetyl-CoA + Spermidine --> Coenzyme A + H+ + N8-Acetylspermidine [C]

General reaction: Acyl group transfer [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8682784; 9384377 [H]