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The map label for this gene is ydaC [H]

Identifier: 138895228

GI number: 138895228

Start: 1653642

End: 1654250

Strand: Direct

Name: ydaC [H]

Synonym: GTNG_1568

Alternate gene names: 138895228

Gene position: 1653642-1654250 (Clockwise)

Preceding gene: 138895227

Following gene: 138895229

Centisome position: 46.58

GC content: 43.35

Gene sequence:

>609_bases
ATGAGTCGATTGTTGATGAATTTATTTGGTCGCCCATATGGTTTTTTGGGAAACATCGGTGGAAGGATTATGGCAGCTGC
TAATAAAGAAATCAACGAATGGACGGTGTCATTATTGGATATACGAAGTAATGATAAGGTACTAGAGATCGGATTTGGTC
CCGGAATTGCCGCTGAGAAGATAAGCAACATTATTAAGGAAGGGATATTCGTAGGAATTGATCCGTCCGAAGTCATGTTT
TCACAGGCGCAAAAAAGGAATGAAGCCGCTATACGGGAAGGAAAAGTCAAGCTACAACTTGCGACTATTGAGCATCTTCC
CGTGTTTAACGAAGCGTTTGATAAAATCTTTTCGATCAATTCGATTCTATTTTGGGAACAACCGATTGAACGATTAAAAG
AGTTGCGGAATTTGCTGAAGCCAAACGGGCTGATTGCCATTACACTCCAGCCTCGTTCCAAGGGGGCAACGAACGAAACA
GCACGCCAGGAAGGGGAAAAGTTAGTTCAGTATCTTAAAGAGGCAGGGTTCTCATCCATTCGACTTGAAGAGAAACAAAC
GAAGCCGGTTTCAGCTGTATGTGCTATCGGTGCTAACCCATCGAGCTGA

Upstream 100 bases:

>100_bases
TGAGGAAAGGAATACTCAAACGGTGAGGAAATGATGCTCGTCAACTTACGCCTACTTTTTATCAAAAACAATTTGAAATC
CATTTTCAAGGAGGTTTTTC

Downstream 100 bases:

>100_bases
ACGACTCCCACTTCGTTGTGCTTGAAGCGGAAATTTCTCAGTTCCACGGCGAAAGCGACCTGTCGTCTCCTTAGGCGTCA
CTTCGAGTCGCCCTAACTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 202; Mature: 201

Protein sequence:

>202_residues
MSRLLMNLFGRPYGFLGNIGGRIMAAANKEINEWTVSLLDIRSNDKVLEIGFGPGIAAEKISNIIKEGIFVGIDPSEVMF
SQAQKRNEAAIREGKVKLQLATIEHLPVFNEAFDKIFSINSILFWEQPIERLKELRNLLKPNGLIAITLQPRSKGATNET
ARQEGEKLVQYLKEAGFSSIRLEEKQTKPVSAVCAIGANPSS

Sequences:

>Translated_202_residues
MSRLLMNLFGRPYGFLGNIGGRIMAAANKEINEWTVSLLDIRSNDKVLEIGFGPGIAAEKISNIIKEGIFVGIDPSEVMF
SQAQKRNEAAIREGKVKLQLATIEHLPVFNEAFDKIFSINSILFWEQPIERLKELRNLLKPNGLIAITLQPRSKGATNET
ARQEGEKLVQYLKEAGFSSIRLEEKQTKPVSAVCAIGANPSS
>Mature_201_residues
SRLLMNLFGRPYGFLGNIGGRIMAAANKEINEWTVSLLDIRSNDKVLEIGFGPGIAAEKISNIIKEGIFVGIDPSEVMFS
QAQKRNEAAIREGKVKLQLATIEHLPVFNEAFDKIFSINSILFWEQPIERLKELRNLLKPNGLIAITLQPRSKGATNETA
RQEGEKLVQYLKEAGFSSIRLEEKQTKPVSAVCAIGANPSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 22369; Mature: 22238

Theoretical pI: Translated: 9.53; Mature: 9.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRLLMNLFGRPYGFLGNIGGRIMAAANKEINEWTVSLLDIRSNDKVLEIGFGPGIAAEK
CHHHHHHHHCCCCCHHHCCCCEEEEECCCCHHHHEEEEEEECCCCCEEEEECCCCHHHHH
ISNIIKEGIFVGIDPSEVMFSQAQKRNEAAIREGKVKLQLATIEHLPVFNEAFDKIFSIN
HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHH
SILFWEQPIERLKELRNLLKPNGLIAITLQPRSKGATNETARQEGEKLVQYLKEAGFSSI
HHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
RLEEKQTKPVSAVCAIGANPSS
EECHHCCCCHHHEEEECCCCCC
>Mature Secondary Structure 
SRLLMNLFGRPYGFLGNIGGRIMAAANKEINEWTVSLLDIRSNDKVLEIGFGPGIAAEK
HHHHHHHHCCCCCHHHCCCCEEEEECCCCHHHHEEEEEEECCCCCEEEEECCCCHHHHH
ISNIIKEGIFVGIDPSEVMFSQAQKRNEAAIREGKVKLQLATIEHLPVFNEAFDKIFSIN
HHHHHHCCCEEECCHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHH
SILFWEQPIERLKELRNLLKPNGLIAITLQPRSKGATNETARQEGEKLVQYLKEAGFSSI
HHEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCEE
RLEEKQTKPVSAVCAIGANPSS
EECHHCCCCHHHEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]