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The map label for this gene is csoR [H]

Identifier: 138895195

GI number: 138895195

Start: 1616426

End: 1616743

Strand: Direct

Name: csoR [H]

Synonym: GTNG_1533

Alternate gene names: 138895195

Gene position: 1616426-1616743 (Clockwise)

Preceding gene: 138895191

Following gene: 138895196

Centisome position: 45.53

GC content: 47.8

Gene sequence:

>318_bases
ATGACTCACCCGTCACAAGAAGAACATGTGCTTCATGGAACGATGATCCCGCGTACGAAAGAGGAAATCGAAAACATTAT
GAAACGGCTAAAACGCATCGAAGGACAAGTGCGCGGGGTGCAGAAAATGGTGGAAGACAATCGCTATTGTATTGATATTT
TAGTCCAAATTTCCGCCATCCAAGCGGCGCTGCGCCAAGTGGGGATGCAACTGCTTGAACGCCATGCGAATCATTGCGTA
GCAAAAGCGATCCGTGAAGGAAGCGGCGAACAATCGCTCCGCGAGTTGATGGATGTGATCAAACAGTTTGCAAAATAA

Upstream 100 bases:

>100_bases
TATCGAAGTGTTTTTTTGTTACGAAAAGAAGATAACGTGTTGTAACTATATACCCCCTTCGGGTATAATGTATATAGACT
AAAAAGAAGAGGTGAATAAG

Downstream 100 bases:

>100_bases
GGGAGGGTTGACCGATGGGAGAGCCAAAAACGGTGACGCTCCGCATCACCGGCATGACGTGCGCCGCCTGCTCGAACCGG
ATCGAAAAAGTGTTGAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Copper-sensitive operon repressor [H]

Number of amino acids: Translated: 105; Mature: 104

Protein sequence:

>105_residues
MTHPSQEEHVLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGMQLLERHANHCV
AKAIREGSGEQSLRELMDVIKQFAK

Sequences:

>Translated_105_residues
MTHPSQEEHVLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGMQLLERHANHCV
AKAIREGSGEQSLRELMDVIKQFAK
>Mature_104_residues
THPSQEEHVLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAIQAALRQVGMQLLERHANHCVA
KAIREGSGEQSLRELMDVIKQFAK

Specific function: Copper-sensitive repressor that has a key role in copper homeostasis. Negatively regulates expression of the copZA operon and of ycnJ. In the absence of copper ions, binds with high affinity to the copZA promoter and represses the transcription. In the pr

COG id: COG1937

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CsoR family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003735 [H]

Pfam domain/function: PF02583 DUF156 [H]

EC number: NA

Molecular weight: Translated: 12087; Mature: 11956

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.7 %Met     (Translated Protein)
7.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHPSQEEHVLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAI
CCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QAALRQVGMQLLERHANHCVAKAIREGSGEQSLRELMDVIKQFAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
THPSQEEHVLHGTMIPRTKEEIENIMKRLKRIEGQVRGVQKMVEDNRYCIDILVQISAI
CCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
QAALRQVGMQLLERHANHCVAKAIREGSGEQSLRELMDVIKQFAK
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]