| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is pip [H]
Identifier: 138895184
GI number: 138895184
Start: 1604253
End: 1606376
Strand: Direct
Name: pip [H]
Synonym: GTNG_1522
Alternate gene names: 138895184
Gene position: 1604253-1606376 (Clockwise)
Preceding gene: 138895183
Following gene: 138895185
Centisome position: 45.19
GC content: 50.89
Gene sequence:
>2124_bases ATGAGAAAAGCTCTGTCCATATACATGAGCGATTTGAAGCAGCTGACGACCAATTGGGCCGCGGCTGTATTGGCTGCCGG ACTGATCGTTCTCCCATCGCTTTATGCATGGATCAATGTGGAGGCCTCATTGGATCCTTATGATAATACGGTGAACTTGC GCGTTGGTGTCGTCAATGAAGACCGTGGAGCGGAATTAGCCGGCCATCGATTCCATGCCGGTAAAGAAATCATCAACGCA CTTCGAAACAACCATCGCCTCGGTTGGCAGTTTGTCACAAAGGCCAAAGGAATGGAGGGCGTACGAAAAGGGGACTATTT TGCGACGATCGTCATCCCCGAGGATTTTTCCGCCAACTTGGCGACCATTGTCCGCGACCGGCCAAAGCGAGCTGTGATTC ATTACTATGAAAACGACAAACGAAACGCCATCGTACCGAAAATTACTGAACGCGGGGTCAGCACGCTGTCGGCGCAAGTC GGGGATGAGTTTACAGCGATTGTCAACACAGTGCTGTTTTCCTTATTCCATGAAGCAGGAGTGACGCTTGAGCAACAGCT CCCGGATATTCGTCATTTTGAAACGCTATTGTTTCGACTGCAAAACGATTTGCCGACAATTGAGAGGCAGCTCGATAAAG CCAGTCGTGACGCTGCACAGGCAAGGCAGTTCATCCAACGAGCAGAACAGCTGTTGCCGAAAGCGGAACAGGTAGTCAAT CAAGGGAGAGAGTGGCTGGATGGGGCGGGACGTTTTTTTGCTCAAACAAAGGAAACTCCCCGGCTGTTTATGGCACCGAC TGAAGCGTGGCTGCGCACTCTTGAAGAGCTCACTGTTTCGTTGGAACAGTGGGCAGCTGCCCCGCCTCGTTCTGATGATG ATTTCGAACGGTGGGCAGCAACCGGCAAGGCAATAGCAACAGATGGCGAACAGCTTTTGTCCCAGTTGGACGATGCACTG CATCGGCTAGAAGGAGCTGCGGATATCGATCGCCCTGCTCATCTAAGGAATGCGCTGATTCGTTTGCGTCAGACGTTTGC GGACATGCAAGACATGGCAATGAGACCGGCTGGGCAATCATTTGAAACGATAGTTGAACATGTTCAAACGCAAGCTGCGG CTGTGGACGCTGCTGTGAAAGGCGTTCGGCAAGCATACGAACAACAGGCGTTGCCGCTCATCCAAACGAAATGGGCGGAA ATGGCGCCGCTCTTTCAGCAGACGAAGCAAAGACTTGAAAACATGGCTGGAGTCATTTCTCGACTTGAACGTCTATTTAC GAACGCCGACCGTGACCTTAAGGCAACCGAACAGTGGTTGACGGCGGCAAAAACGGAGTATCCGTTTCTTGCCCGCCATG TTAGCGAATTGACGGCGTTAGTCGCCAAAATGAAATCAGAAACGGACATCAATGAACTCATCCACTTATTGAAACAAGAT CCGCAGGCGAAAGGTGCCTTTTTAGCCCATCCGGTCGATGTCAAAACTTATCGTCTCTTTCCGCTGCCGAACTATGGATC GGGCATGAATCCGTTTTATACGGTGCTAGCGATTTGGGTTGGAGGGTTGTTGCTTGTTTCAGTGCTAGTGATTGACCCAT TTAGAGAAAACGGCAATACGGCACGAGCGATGTATATCGGCCGACTGCTCACATTTTGGACGCTCAATCTATTGCAGGCG TTTGTCGTTACGGTTGGTGCAGCCATGTTTTTGCCTCACATTTTCATTCGTGATCCGCACTGGTTTGTGATGTTCGGCCT GCTGGCCGGCATGGTATTTACGGTCATTATTTTTACTTTGGTGTCTTTGTTTGGCAATGTGGGAAAAGCGATGGCGATTA TCCTGCTTGTCTTGCAAATCGCTGGAGCAGGGGGAACGTACCCTGTTGAGCTGATTCCCCCATTTTTTCGCCTGTTGAAT CCTTGGTTGCCGTTTACGTACGCAATTGATTTGATGCGCGAGGCGGTTGGTGGCATCGTATGGGAAAACGTGAGGCGCGA TGTGGTGCGACTCTGTTTGTTCGCGGTCGCAGCGCTTTTAGCCGGCCTGTCGTTCCAAGCTCCGCTTAGCCGATGGATGC GGGTGTTCAAAGAAAAAGTCGCTGAGAGTAAGTTGTTTCATTGA
Upstream 100 bases:
>100_bases CCGTAAATGAACATAAGTGGCCCAGTTTCGTTTAGTTTTCATGGATTCGCTCATACTAACAAAGGTCATCTATCATCGAA GAAAGGAAAGCGGATCCGTT
Downstream 100 bases:
>100_bases GTGCCTGCTGCCCGCGTCCATGCGGTCGAACCGGAACATACAGGCGTCTTATATCGGTTTGCCAAACAGCGGGTTCCTGC TGCCGCACTGTAAAGGCTGG
Product: Phage infection protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 707; Mature: 707
Protein sequence:
>707_residues MRKALSIYMSDLKQLTTNWAAAVLAAGLIVLPSLYAWINVEASLDPYDNTVNLRVGVVNEDRGAELAGHRFHAGKEIINA LRNNHRLGWQFVTKAKGMEGVRKGDYFATIVIPEDFSANLATIVRDRPKRAVIHYYENDKRNAIVPKITERGVSTLSAQV GDEFTAIVNTVLFSLFHEAGVTLEQQLPDIRHFETLLFRLQNDLPTIERQLDKASRDAAQARQFIQRAEQLLPKAEQVVN QGREWLDGAGRFFAQTKETPRLFMAPTEAWLRTLEELTVSLEQWAAAPPRSDDDFERWAATGKAIATDGEQLLSQLDDAL HRLEGAADIDRPAHLRNALIRLRQTFADMQDMAMRPAGQSFETIVEHVQTQAAAVDAAVKGVRQAYEQQALPLIQTKWAE MAPLFQQTKQRLENMAGVISRLERLFTNADRDLKATEQWLTAAKTEYPFLARHVSELTALVAKMKSETDINELIHLLKQD PQAKGAFLAHPVDVKTYRLFPLPNYGSGMNPFYTVLAIWVGGLLLVSVLVIDPFRENGNTARAMYIGRLLTFWTLNLLQA FVVTVGAAMFLPHIFIRDPHWFVMFGLLAGMVFTVIIFTLVSLFGNVGKAMAIILLVLQIAGAGGTYPVELIPPFFRLLN PWLPFTYAIDLMREAVGGIVWENVRRDVVRLCLFAVAALLAGLSFQAPLSRWMRVFKEKVAESKLFH
Sequences:
>Translated_707_residues MRKALSIYMSDLKQLTTNWAAAVLAAGLIVLPSLYAWINVEASLDPYDNTVNLRVGVVNEDRGAELAGHRFHAGKEIINA LRNNHRLGWQFVTKAKGMEGVRKGDYFATIVIPEDFSANLATIVRDRPKRAVIHYYENDKRNAIVPKITERGVSTLSAQV GDEFTAIVNTVLFSLFHEAGVTLEQQLPDIRHFETLLFRLQNDLPTIERQLDKASRDAAQARQFIQRAEQLLPKAEQVVN QGREWLDGAGRFFAQTKETPRLFMAPTEAWLRTLEELTVSLEQWAAAPPRSDDDFERWAATGKAIATDGEQLLSQLDDAL HRLEGAADIDRPAHLRNALIRLRQTFADMQDMAMRPAGQSFETIVEHVQTQAAAVDAAVKGVRQAYEQQALPLIQTKWAE MAPLFQQTKQRLENMAGVISRLERLFTNADRDLKATEQWLTAAKTEYPFLARHVSELTALVAKMKSETDINELIHLLKQD PQAKGAFLAHPVDVKTYRLFPLPNYGSGMNPFYTVLAIWVGGLLLVSVLVIDPFRENGNTARAMYIGRLLTFWTLNLLQA FVVTVGAAMFLPHIFIRDPHWFVMFGLLAGMVFTVIIFTLVSLFGNVGKAMAIILLVLQIAGAGGTYPVELIPPFFRLLN PWLPFTYAIDLMREAVGGIVWENVRRDVVRLCLFAVAALLAGLSFQAPLSRWMRVFKEKVAESKLFH >Mature_707_residues MRKALSIYMSDLKQLTTNWAAAVLAAGLIVLPSLYAWINVEASLDPYDNTVNLRVGVVNEDRGAELAGHRFHAGKEIINA LRNNHRLGWQFVTKAKGMEGVRKGDYFATIVIPEDFSANLATIVRDRPKRAVIHYYENDKRNAIVPKITERGVSTLSAQV GDEFTAIVNTVLFSLFHEAGVTLEQQLPDIRHFETLLFRLQNDLPTIERQLDKASRDAAQARQFIQRAEQLLPKAEQVVN QGREWLDGAGRFFAQTKETPRLFMAPTEAWLRTLEELTVSLEQWAAAPPRSDDDFERWAATGKAIATDGEQLLSQLDDAL HRLEGAADIDRPAHLRNALIRLRQTFADMQDMAMRPAGQSFETIVEHVQTQAAAVDAAVKGVRQAYEQQALPLIQTKWAE MAPLFQQTKQRLENMAGVISRLERLFTNADRDLKATEQWLTAAKTEYPFLARHVSELTALVAKMKSETDINELIHLLKQD PQAKGAFLAHPVDVKTYRLFPLPNYGSGMNPFYTVLAIWVGGLLLVSVLVIDPFRENGNTARAMYIGRLLTFWTLNLLQA FVVTVGAAMFLPHIFIRDPHWFVMFGLLAGMVFTVIIFTLVSLFGNVGKAMAIILLVLQIAGAGGTYPVELIPPFFRLLN PWLPFTYAIDLMREAVGGIVWENVRRDVVRLCLFAVAALLAGLSFQAPLSRWMRVFKEKVAESKLFH
Specific function: Required for phage infection [H]
COG id: COG1511
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-2 domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013525 - InterPro: IPR017501 - InterPro: IPR017500 [H]
Pfam domain/function: PF01061 ABC2_membrane [H]
EC number: NA
Molecular weight: Translated: 79471; Mature: 79471
Theoretical pI: Translated: 7.94; Mature: 7.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKALSIYMSDLKQLTTNWAAAVLAAGLIVLPSLYAWINVEASLDPYDNTVNLRVGVVNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEEC DRGAELAGHRFHAGKEIINALRNNHRLGWQFVTKAKGMEGVRKGDYFATIVIPEDFSANL CCCCCHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH ATIVRDRPKRAVIHYYENDKRNAIVPKITERGVSTLSAQVGDEFTAIVNTVLFSLFHEAG HHHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC VTLEQQLPDIRHFETLLFRLQNDLPTIERQLDKASRDAAQARQFIQRAEQLLPKAEQVVN CCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QGREWLDGAGRFFAQTKETPRLFMAPTEAWLRTLEELTVSLEQWAAAPPRSDDDFERWAA HCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH TGKAIATDGEQLLSQLDDALHRLEGAADIDRPAHLRNALIRLRQTFADMQDMAMRPAGQS CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FETIVEHVQTQAAAVDAAVKGVRQAYEQQALPLIQTKWAEMAPLFQQTKQRLENMAGVIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLERLFTNADRDLKATEQWLTAAKTEYPFLARHVSELTALVAKMKSETDINELIHLLKQD HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PQAKGAFLAHPVDVKTYRLFPLPNYGSGMNPFYTVLAIWVGGLLLVSVLVIDPFRENGNT CCCCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH ARAMYIGRLLTFWTLNLLQAFVVTVGAAMFLPHIFIRDPHWFVMFGLLAGMVFTVIIFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VSLFGNVGKAMAIILLVLQIAGAGGTYPVELIPPFFRLLNPWLPFTYAIDLMREAVGGIV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WENVRRDVVRLCLFAVAALLAGLSFQAPLSRWMRVFKEKVAESKLFH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MRKALSIYMSDLKQLTTNWAAAVLAAGLIVLPSLYAWINVEASLDPYDNTVNLRVGVVNE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEEC DRGAELAGHRFHAGKEIINALRNNHRLGWQFVTKAKGMEGVRKGDYFATIVIPEDFSANL CCCCCHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCH ATIVRDRPKRAVIHYYENDKRNAIVPKITERGVSTLSAQVGDEFTAIVNTVLFSLFHEAG HHHHHCCCCHHEEEEEECCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHC VTLEQQLPDIRHFETLLFRLQNDLPTIERQLDKASRDAAQARQFIQRAEQLLPKAEQVVN CCHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH QGREWLDGAGRFFAQTKETPRLFMAPTEAWLRTLEELTVSLEQWAAAPPRSDDDFERWAA HCHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHH TGKAIATDGEQLLSQLDDALHRLEGAADIDRPAHLRNALIRLRQTFADMQDMAMRPAGQS CCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC FETIVEHVQTQAAAVDAAVKGVRQAYEQQALPLIQTKWAEMAPLFQQTKQRLENMAGVIS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RLERLFTNADRDLKATEQWLTAAKTEYPFLARHVSELTALVAKMKSETDINELIHLLKQD HHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCC PQAKGAFLAHPVDVKTYRLFPLPNYGSGMNPFYTVLAIWVGGLLLVSVLVIDPFRENGNT CCCCCCEEECCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCH ARAMYIGRLLTFWTLNLLQAFVVTVGAAMFLPHIFIRDPHWFVMFGLLAGMVFTVIIFTL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VSLFGNVGKAMAIILLVLQIAGAGGTYPVELIPPFFRLLNPWLPFTYAIDLMREAVGGIV HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH WENVRRDVVRLCLFAVAALLAGLSFQAPLSRWMRVFKEKVAESKLFH HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8366036 [H]