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The map label for this gene is cbaB [H]

Identifier: 138895179

GI number: 138895179

Start: 1600166

End: 1600756

Strand: Direct

Name: cbaB [H]

Synonym: GTNG_1517

Alternate gene names: 138895179

Gene position: 1600166-1600756 (Clockwise)

Preceding gene: 138895176

Following gene: 138895180

Centisome position: 45.07

GC content: 48.56

Gene sequence:

>591_bases
ATGCCCTATAGTGAAACTATCTTGACGAGGGAAAAGGGGGAATGGATAGCCATGTACCAACAAGCAGCGTGGGTCATCTC
CGTTGTTTTCATCTTGTTTGTCATTTTCGTTTTTTTATACGTCGTCGCTCATTCCGGCCAGCGCTCCGAATATGAGCCAA
TTCAGAAAAAAGGCTATCGGATCCGGAATGTATGGTTTTTGGTCGTCATTGCGGCCATGGGTCTAGCGACGTTTTATACG
CTGCGCGATTTGCCGTTTGAAAGGCCAGCGCATGCTGCCGATCCGACCGTTGTTCAAGTGGAAGCGCGGCAATTTGGTTT
TGTATTAAGCCGAAATGAATTTCGTGTCGGTGAGCCGATCGCCTTTCAAGTGACGAGCGTAGATGTCAATCACGGAGTCG
GCATTTATGATGAAAACATGGAACTGTTGGCCCAGACGCAAGCCATGCCGAAGTATACCAATACGATGTATTACACGTTT
GAGAAGCCGGGGACGTATCAAGTACTTTGTTTAGAATATTGTGGCATCGGCCACCATGTGATGACGGCGACCATTACCGT
CGTGCCGTCCCAAGAAGGGGAGGGGAAATAA

Upstream 100 bases:

>100_bases
TGTCACATAACTGTGTACTCTATCACATCAGACAAAAAAATCCAAATTGTGAGAAAAATTGTCTGTTTTGTGATGAAGTT
AACTGTGAGAAAACGCTACC

Downstream 100 bases:

>100_bases
TGGAAGCGAACGTTCGGAAGATGACCGCCTTGTACATGTTCGTCAGCGGTATTGCGATTTTGCTTATGATGGTGCTTGGG
CTGTTGATGTTGTTGGCACA

Product: b(o/a)3-type cytochrome c oxidase subunit II-like protein

Products: NA

Alternate protein names: Cytochrome c ba(3) subunit II; Cytochrome c oxidase polypeptide II; Cytochrome cba3 subunit 2 [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MPYSETILTREKGEWIAMYQQAAWVISVVFILFVIFVFLYVVAHSGQRSEYEPIQKKGYRIRNVWFLVVIAAMGLATFYT
LRDLPFERPAHAADPTVVQVEARQFGFVLSRNEFRVGEPIAFQVTSVDVNHGVGIYDENMELLAQTQAMPKYTNTMYYTF
EKPGTYQVLCLEYCGIGHHVMTATITVVPSQEGEGK

Sequences:

>Translated_196_residues
MPYSETILTREKGEWIAMYQQAAWVISVVFILFVIFVFLYVVAHSGQRSEYEPIQKKGYRIRNVWFLVVIAAMGLATFYT
LRDLPFERPAHAADPTVVQVEARQFGFVLSRNEFRVGEPIAFQVTSVDVNHGVGIYDENMELLAQTQAMPKYTNTMYYTF
EKPGTYQVLCLEYCGIGHHVMTATITVVPSQEGEGK
>Mature_195_residues
PYSETILTREKGEWIAMYQQAAWVISVVFILFVIFVFLYVVAHSGQRSEYEPIQKKGYRIRNVWFLVVIAAMGLATFYTL
RDLPFERPAHAADPTVVQVEARQFGFVLSRNEFRVGEPIAFQVTSVDVNHGVGIYDENMELLAQTQAMPKYTNTMYYTFE
KPGTYQVLCLEYCGIGHHVMTATITVVPSQEGEGK

Specific function: Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001505
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR015209 [H]

Pfam domain/function: PF00116 COX2; PF09125 COX2-transmemb [H]

EC number: =1.9.3.1 [H]

Molecular weight: Translated: 22366; Mature: 22235

Theoretical pI: Translated: 6.00; Mature: 6.00

Prosite motif: PS00078 COX2 ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYSETILTREKGEWIAMYQQAAWVISVVFILFVIFVFLYVVAHSGQRSEYEPIQKKGYR
CCCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
IRNVWFLVVIAAMGLATFYTLRDLPFERPAHAADPTVVQVEARQFGFVLSRNEFRVGEPI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCEEEECCCCCCCCCE
AFQVTSVDVNHGVGIYDENMELLAQTQAMPKYTNTMYYTFEKPGTYQVLCLEYCGIGHHV
EEEEEEEECCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEE
MTATITVVPSQEGEGK
EEEEEEEEECCCCCCC
>Mature Secondary Structure 
PYSETILTREKGEWIAMYQQAAWVISVVFILFVIFVFLYVVAHSGQRSEYEPIQKKGYR
CCCCCEEECCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCC
IRNVWFLVVIAAMGLATFYTLRDLPFERPAHAADPTVVQVEARQFGFVLSRNEFRVGEPI
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEHHHCCEEEECCCCCCCCCE
AFQVTSVDVNHGVGIYDENMELLAQTQAMPKYTNTMYYTFEKPGTYQVLCLEYCGIGHHV
EEEEEEEECCCCCCEEECCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEEEECCCCCCEE
MTATITVVPSQEGEGK
EEEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7657607; 10775261 [H]