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The map label for this gene is ypmR [H]

Identifier: 138895156

GI number: 138895156

Start: 1578519

End: 1579316

Strand: Direct

Name: ypmR [H]

Synonym: GTNG_1494

Alternate gene names: 138895156

Gene position: 1578519-1579316 (Clockwise)

Preceding gene: 138895155

Following gene: 138895157

Centisome position: 44.46

GC content: 54.14

Gene sequence:

>798_bases
ATGCGACGCAACATTGTATCGCTTTTAATGATGGTTGCCGCGCTGTCTGCGCTGCTTTGGCTCGGCGGCCTTGCCTTAGT
GGTGCAAGACCAGCTGTTTACGGCTGCCAAACCCTCGGTCGAACAAAAGCGGCCATCAGCCAACGAAGCAAAGAAGCGCG
ATGGGGAGATTGATATTGTCGCCTTAGGCGACTCGCTGACGCGGGGAACGGGCGATGAAAGTGGCAAAGGGTATATCGGC
TATATGGTCGATGAGCTTCGCCAACAGACAGATGAACCGATTCGCGTCACCAATTTGGCGATCCGCGGCCTGCGCTCCGA
CGGACTGCTCCGTCAGCTTGGCCAGTCTGAGATTCAGCGGCAAATCGCCATGGCCGATCTGATTGTGATGACGATCGGCG
GCAACGATTTGTTTCAGGGGGGAGAGGCGCTTGAGTGGAATGTGAAAGAGCTCGATGAGGCGAAACGGCAGTATATTGCG
AACCTTGACCGCATTTTTGCCTTGCTTCGCCGCTTGAACAGCGAAGCGGTCATTTTTGCGATCGGCCTGTACAATCCGTT
TAGCGATTTAGATGATGCCAAACGAACGTCGGCCATTGTTCGCGATTGGAATTTTGCATCAGCCGAAGTGGCGGCCCACT
ATCCGAATATCGTCGCTGTGCCGACGTTTGACTTATTTGCCTTGCATGTCAACGACTATTTGTATAGCGATCATTTCCAT
CCGAATAAGGAAGGGTACAAGCGGATCGGGGAGCGCGTCGCCTCGCTCATTACGTTGACGGAGGAGGATCGCCAGTGA

Upstream 100 bases:

>100_bases
CATTGGCGAATCAAACAGCGCCGCTTGGACGAAACAAATGATGACGAGACAAGTCGAGACCAAACGCAAGAGGGAATAAT
GCGGAAGTGAGGTGATTGGC

Downstream 100 bases:

>100_bases
CGAAACAGGTAACGTTAGCAGTTAAAGAGCTGCGGAAAACGATTCGTGGCAAAGAAATTATTAAAGGGATTTCGTTTGAA
TTGCGCGAAGGGGAAGTGTT

Product: lipase/acylhydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 265; Mature: 265

Protein sequence:

>265_residues
MRRNIVSLLMMVAALSALLWLGGLALVVQDQLFTAAKPSVEQKRPSANEAKKRDGEIDIVALGDSLTRGTGDESGKGYIG
YMVDELRQQTDEPIRVTNLAIRGLRSDGLLRQLGQSEIQRQIAMADLIVMTIGGNDLFQGGEALEWNVKELDEAKRQYIA
NLDRIFALLRRLNSEAVIFAIGLYNPFSDLDDAKRTSAIVRDWNFASAEVAAHYPNIVAVPTFDLFALHVNDYLYSDHFH
PNKEGYKRIGERVASLITLTEEDRQ

Sequences:

>Translated_265_residues
MRRNIVSLLMMVAALSALLWLGGLALVVQDQLFTAAKPSVEQKRPSANEAKKRDGEIDIVALGDSLTRGTGDESGKGYIG
YMVDELRQQTDEPIRVTNLAIRGLRSDGLLRQLGQSEIQRQIAMADLIVMTIGGNDLFQGGEALEWNVKELDEAKRQYIA
NLDRIFALLRRLNSEAVIFAIGLYNPFSDLDDAKRTSAIVRDWNFASAEVAAHYPNIVAVPTFDLFALHVNDYLYSDHFH
PNKEGYKRIGERVASLITLTEEDRQ
>Mature_265_residues
MRRNIVSLLMMVAALSALLWLGGLALVVQDQLFTAAKPSVEQKRPSANEAKKRDGEIDIVALGDSLTRGTGDESGKGYIG
YMVDELRQQTDEPIRVTNLAIRGLRSDGLLRQLGQSEIQRQIAMADLIVMTIGGNDLFQGGEALEWNVKELDEAKRQYIA
NLDRIFALLRRLNSEAVIFAIGLYNPFSDLDDAKRTSAIVRDWNFASAEVAAHYPNIVAVPTFDLFALHVNDYLYSDHFH
PNKEGYKRIGERVASLITLTEEDRQ

Specific function: Unknown

COG id: COG2755

COG function: function code E; Lysophospholipase L1 and related esterases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013830
- InterPro:   IPR013831
- InterPro:   IPR001087 [H]

Pfam domain/function: PF00657 Lipase_GDSL [H]

EC number: NA

Molecular weight: Translated: 29608; Mature: 29608

Theoretical pI: Translated: 5.04; Mature: 5.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRNIVSLLMMVAALSALLWLGGLALVVQDQLFTAAKPSVEQKRPSANEAKKRDGEIDIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCEEEE
ALGDSLTRGTGDESGKGYIGYMVDELRQQTDEPIRVTNLAIRGLRSDGLLRQLGQSEIQR
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHH
QIAMADLIVMTIGGNDLFQGGEALEWNVKELDEAKRQYIANLDRIFALLRRLNSEAVIFA
HHHHHHEEEEEECCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGLYNPFSDLDDAKRTSAIVRDWNFASAEVAAHYPNIVAVPTFDLFALHVNDYLYSDHFH
EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCHHEEEEEHHHHHHCCCCC
PNKEGYKRIGERVASLITLTEEDRQ
CCHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRRNIVSLLMMVAALSALLWLGGLALVVQDQLFTAAKPSVEQKRPSANEAKKRDGEIDIV
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHHHCCCCEEEE
ALGDSLTRGTGDESGKGYIGYMVDELRQQTDEPIRVTNLAIRGLRSDGLLRQLGQSEIQR
EECCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEHHHHHHCCCCCHHHHHHHHHHHHH
QIAMADLIVMTIGGNDLFQGGEALEWNVKELDEAKRQYIANLDRIFALLRRLNSEAVIFA
HHHHHHEEEEEECCCHHHCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
IGLYNPFSDLDDAKRTSAIVRDWNFASAEVAAHYPNIVAVPTFDLFALHVNDYLYSDHFH
EECCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEECCHHEEEEEHHHHHHCCCCC
PNKEGYKRIGERVASLITLTEEDRQ
CCHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 3145906 [H]