| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
Click here to switch to the map view.
The map label for this gene is 138895147
Identifier: 138895147
GI number: 138895147
Start: 1570656
End: 1571402
Strand: Direct
Name: 138895147
Synonym: GTNG_1485
Alternate gene names: NA
Gene position: 1570656-1571402 (Clockwise)
Preceding gene: 138895146
Following gene: 138895148
Centisome position: 44.24
GC content: 42.84
Gene sequence:
>747_bases ATGAGAAATGTTGTGATCCCGCTCAATGCCTTGGATAGAAACGAAGTGCGAGAAAAAGGGCAACGGTTTTTTATTCAAAA AATGTACGGGACGGGAGTTTCTGGAGTAGAGATTCGGAGGGAGCTGTTAACGGTTCACGATCATCCGCTTGGGCATTTGA AAACGATTGCTGACGAAATGGGGATGTTTCTTGTTTACTCTTCTCCCAGTCCTCTTTGGGTGGCAAACGGGCGGTTAAAC GAAGAACTTCGTCTTGTCATCCAGGAAGCAAAAGAGTTAGGAGCGGTGATGTTAAAAGTACCGTTAGGCTGTTACGATCC CCTTCTTTGCGAGATGGACGATTTAAAGACATTGTTAGAAGAAATCAAGGAACAGTTGCAACTGTTCATCGAAAATGATC AAACCCCTAATGGGGGGACCATTTCCTCTTTATACCGGTTTTTCAACGACATTCATGAGTATCAACTGCCTGTTTATATG ACGTTCGATATTGGAAATTGGAAATATTGCGGAGAAAGTGCAGCGGTTGCCCTAAGCCATTTTCATCCCTTTATCCGTTA CGTCCATCTGAAACATGTGGAAAAGTATGATGGGGGATTGAAAACGGTTCCGTTAACAGAAGAAAACTCGAAAGAATGGA AAGCGATTTTAAGGGCATTTTCGACTGACTTGCCGATTGCACTAGAATTTCCGATCAATGATGTTGAGTTCATACCATAT TACATTCGTTTGCTTCAAGCACCGTAG
Upstream 100 bases:
>100_bases AAAATGATTGACAGATAATTCAGTGAGTGATAAAATGCTTCTTGTAAAACGATTTACTAAAACGTTTTACAAAACAAATA ATAAAGGGGGTGATGTGAAT
Downstream 100 bases:
>100_bases AAAGAGGGGAGTCTGCGAATGGATGTTGTGACATTCGGAGAAGCGATGGTGATGTTTATTGCGACCGAAATAGGGTCGCT GCACCGTGTGCGTTGTTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; Epimerase; Sugar Phosphate Isomerase/Epimerase; Epimerase KguE; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like TIM Barrel; Sugar Isomerase; Epimerase KguE-Like; Sugar Phosphatase Isomerase/Epimerase; Sugar Isomerase/Epimerase; Sugar Or Sugar Phosphate Isomerase; Sugar Phosphate Isomerases/Epimerase
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRNVVIPLNALDRNEVREKGQRFFIQKMYGTGVSGVEIRRELLTVHDHPLGHLKTIADEMGMFLVYSSPSPLWVANGRLN EELRLVIQEAKELGAVMLKVPLGCYDPLLCEMDDLKTLLEEIKEQLQLFIENDQTPNGGTISSLYRFFNDIHEYQLPVYM TFDIGNWKYCGESAAVALSHFHPFIRYVHLKHVEKYDGGLKTVPLTEENSKEWKAILRAFSTDLPIALEFPINDVEFIPY YIRLLQAP
Sequences:
>Translated_248_residues MRNVVIPLNALDRNEVREKGQRFFIQKMYGTGVSGVEIRRELLTVHDHPLGHLKTIADEMGMFLVYSSPSPLWVANGRLN EELRLVIQEAKELGAVMLKVPLGCYDPLLCEMDDLKTLLEEIKEQLQLFIENDQTPNGGTISSLYRFFNDIHEYQLPVYM TFDIGNWKYCGESAAVALSHFHPFIRYVHLKHVEKYDGGLKTVPLTEENSKEWKAILRAFSTDLPIALEFPINDVEFIPY YIRLLQAP >Mature_248_residues MRNVVIPLNALDRNEVREKGQRFFIQKMYGTGVSGVEIRRELLTVHDHPLGHLKTIADEMGMFLVYSSPSPLWVANGRLN EELRLVIQEAKELGAVMLKVPLGCYDPLLCEMDDLKTLLEEIKEQLQLFIENDQTPNGGTISSLYRFFNDIHEYQLPVYM TFDIGNWKYCGESAAVALSHFHPFIRYVHLKHVEKYDGGLKTVPLTEENSKEWKAILRAFSTDLPIALEFPINDVEFIPY YIRLLQAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28572; Mature: 28572
Theoretical pI: Translated: 5.37; Mature: 5.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRNVVIPLNALDRNEVREKGQRFFIQKMYGTGVSGVEIRRELLTVHDHPLGHLKTIADEM CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHC GMFLVYSSPSPLWVANGRLNEELRLVIQEAKELGAVMLKVPLGCYDPLLCEMDDLKTLLE CEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHCCHHHHHHHHH EIKEQLQLFIENDQTPNGGTISSLYRFFNDIHEYQLPVYMTFDIGNWKYCGESAAVALSH HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHH FHPFIRYVHLKHVEKYDGGLKTVPLTEENSKEWKAILRAFSTDLPIALEFPINDVEFIPY HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHH YIRLLQAP HHHHHCCC >Mature Secondary Structure MRNVVIPLNALDRNEVREKGQRFFIQKMYGTGVSGVEIRRELLTVHDHPLGHLKTIADEM CCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHC GMFLVYSSPSPLWVANGRLNEELRLVIQEAKELGAVMLKVPLGCYDPLLCEMDDLKTLLE CEEEEECCCCCEEEECCCCCHHHHHHHHHHHHHHHEEEECCCCCCCCHHCCHHHHHHHHH EIKEQLQLFIENDQTPNGGTISSLYRFFNDIHEYQLPVYMTFDIGNWKYCGESAAVALSH HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCEECCCHHHHHHHH FHPFIRYVHLKHVEKYDGGLKTVPLTEENSKEWKAILRAFSTDLPIALEFPINDVEFIPY HHHHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHH YIRLLQAP HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA