Click here to switch to the map view.

The map label for this gene is yufP [H]

Identifier: 138894805

GI number: 138894805

Start: 1204100

End: 1205146

Strand: Direct

Name: yufP [H]

Synonym: GTNG_1139

Alternate gene names: 138894805

Gene position: 1204100-1205146 (Clockwise)

Preceding gene: 138894804

Following gene: 138894806

Centisome position: 33.92

GC content: 52.44

Gene sequence:

>1047_bases
ATGAGGTCGAATCGTCATCAGCAATTTTTGATTCCATTGTTGGCCGTTTTGCTCGGCATGATCGCCGGCTCGATCGTCAT
GCTCGTAAGCGGCTATAATCCGGTCGCGGGCTTCAGCTCTCTGATTTACGGAGCGTTCGGCGATGCGTATTACATCGGGG
AAACGATCCGCCAGACGACTCCCTACATTTTAACAGGGCTAGCGGTAGCCTTCGCCTTTCGCACCGGTTTATTTAACATC
GGGGTCGAAGGGCAACTCATCGTCGGCTGGCTTGCCGCCGTTTGGGTTGGGGTGTCTTTCGACTTGCCGAAGATCATCCA
CTTGCCGCTTGCCATTTTGGCCGCCGCTGCAGCCGGGGCACTGTGGGGATTGATCCCGGGGGTATTAAAGGCGTACGTAA
AAGTGCATGAAGTCATTATTACGATTATGATGAACTATATCGCTTTACACGTGACGAATGCCATCATCCGTTCTGTGCTG
TCGGATGAGGGATTTAAATCGGAGCCGATCAAACAAAGCGCCTCTCTCCAATCGGAGTTTTTGGAGGCCATGACGTACCA
CTCGACGATGCACTATGGCATTTTGATCGCCATTGCTGCCGCATTTGTCATGTGGTTTTTGCTTGAGCGGACGACGAAAG
GATTTGAGTTGCGGGCGGTTGGATTCAACCAACATGCCTCACAGTATGCCGGCATGAACGTGCGCGCCAATATTATTTTA
GCCATGGTCATTTCCGGTGCCTTTGCCGGTGTGGCCGGGGCGATGGAAGGGCTCGGCACGTTCGGCAACATTTCGACGAA
AGCCGGGTTTACCGGACTTGGATTTGACGGCATCGCTGTTGCCTTAATTGGCGGCAACAACGCGTTTGGCATTTTGCTTT
CTGCGTTGCTATTTGGCGCCTTGAAAGTCGGGGCGCTTGAGATGCCATCGGGCGCCGGCGTACCAACGGAACTTGTCGAT
ATTATTATCGCACTCATTATTTTCTTTGTCGCATCCAGCTATATGATTCGTTGGCTGTTATCTCGTGGGCAAAAGGGGGC
GGAGTAA

Upstream 100 bases:

>100_bases
AAGGGAAAATTATCGCCATCGTTGATCCGAAAGAAACAACGGAACAAGAACTCGGGCTGCTGATGGCTGGAAGTAAACGG
AAGGAAGCAGGTGTGTCGTC

Downstream 100 bases:

>100_bases
GTGAACGTATATGATGTATTGCAAACGATTATCCCAACAGCCATTTTCTTTGCTGCTCCCCTTATTTTCACCGCGCTTGG
TGGCGTGTTTAGCGAACGAT

Product: sugar ABC transporter permease

Products: ADP; phosphate; ribose [Cytoplasm]; D-allose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MRSNRHQQFLIPLLAVLLGMIAGSIVMLVSGYNPVAGFSSLIYGAFGDAYYIGETIRQTTPYILTGLAVAFAFRTGLFNI
GVEGQLIVGWLAAVWVGVSFDLPKIIHLPLAILAAAAAGALWGLIPGVLKAYVKVHEVIITIMMNYIALHVTNAIIRSVL
SDEGFKSEPIKQSASLQSEFLEAMTYHSTMHYGILIAIAAAFVMWFLLERTTKGFELRAVGFNQHASQYAGMNVRANIIL
AMVISGAFAGVAGAMEGLGTFGNISTKAGFTGLGFDGIAVALIGGNNAFGILLSALLFGALKVGALEMPSGAGVPTELVD
IIIALIIFFVASSYMIRWLLSRGQKGAE

Sequences:

>Translated_348_residues
MRSNRHQQFLIPLLAVLLGMIAGSIVMLVSGYNPVAGFSSLIYGAFGDAYYIGETIRQTTPYILTGLAVAFAFRTGLFNI
GVEGQLIVGWLAAVWVGVSFDLPKIIHLPLAILAAAAAGALWGLIPGVLKAYVKVHEVIITIMMNYIALHVTNAIIRSVL
SDEGFKSEPIKQSASLQSEFLEAMTYHSTMHYGILIAIAAAFVMWFLLERTTKGFELRAVGFNQHASQYAGMNVRANIIL
AMVISGAFAGVAGAMEGLGTFGNISTKAGFTGLGFDGIAVALIGGNNAFGILLSALLFGALKVGALEMPSGAGVPTELVD
IIIALIIFFVASSYMIRWLLSRGQKGAE
>Mature_348_residues
MRSNRHQQFLIPLLAVLLGMIAGSIVMLVSGYNPVAGFSSLIYGAFGDAYYIGETIRQTTPYILTGLAVAFAFRTGLFNI
GVEGQLIVGWLAAVWVGVSFDLPKIIHLPLAILAAAAAGALWGLIPGVLKAYVKVHEVIITIMMNYIALHVTNAIIRSVL
SDEGFKSEPIKQSASLQSEFLEAMTYHSTMHYGILIAIAAAFVMWFLLERTTKGFELRAVGFNQHASQYAGMNVRANIIL
AMVISGAFAGVAGAMEGLGTFGNISTKAGFTGLGFDGIAVALIGGNNAFGILLSALLFGALKVGALEMPSGAGVPTELVD
IIIALIIFFVASSYMIRWLLSRGQKGAE

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36940; Mature: 36940

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSNRHQQFLIPLLAVLLGMIAGSIVMLVSGYNPVAGFSSLIYGAFGDAYYIGETIRQTT
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCC
PYILTGLAVAFAFRTGLFNIGVEGQLIVGWLAAVWVGVSFDLPKIIHLPLAILAAAAAGA
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
LWGLIPGVLKAYVKVHEVIITIMMNYIALHVTNAIIRSVLSDEGFKSEPIKQSASLQSEF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
LEAMTYHSTMHYGILIAIAAAFVMWFLLERTTKGFELRAVGFNQHASQYAGMNVRANIIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHCCCCHHHHHHH
AMVISGAFAGVAGAMEGLGTFGNISTKAGFTGLGFDGIAVALIGGNNAFGILLSALLFGA
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH
LKVGALEMPSGAGVPTELVDIIIALIIFFVASSYMIRWLLSRGQKGAE
HHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure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HHHCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; ribose [Periplasm]; D-allose [Periplasm]; ATP [C]

Specific reaction: ATP + H2O + ribose [Periplasm] = ADP + phosphate + ribose [Cytoplasm] D-allose [Periplasm] + ATP + H2O = D-allose [Cytoplasm] + ADP + phosphate [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]