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The map label for this gene is ylxR [H]

Identifier: 138894781

GI number: 138894781

Start: 1178992

End: 1179288

Strand: Direct

Name: ylxR [H]

Synonym: GTNG_1115

Alternate gene names: 138894781

Gene position: 1178992-1179288 (Clockwise)

Preceding gene: 138894780

Following gene: 138894782

Centisome position: 33.21

GC content: 48.82

Gene sequence:

>297_bases
ATGAAGATGGCAGCGCAAAAGAAAATTCCGTTGCGCAAATGCGTCGTCACCGGAGAGATGAAGCCGAAACGGGAAATGGT
GCGCATCGTCCGCTCGAAAGAAGGAGACGTATCGATTGACCCGACTGGCAAAAAGGCGGGGCGCGGTGCGTATATTACAC
TCGATCCGGAATGTATTTTGCAGGCGAAAAAGAAAAATATTTTGGCCCGCCATTTAAAAGCTGATATCGCCGACGCGCTG
TATGATGAACTGCTTGCCTTGGCGGAAAAGGAGAAACAGGTAGGATATGAAAAATAG

Upstream 100 bases:

>100_bases
ATCCACTTCGCTTGATTTCGACGGCGTGACGGCCGATAATGAAAATAGTGATGAGAGCGGTCAACCATTTGATGCAACGG
CGGAAATCGAGTGAGGGGGA

Downstream 100 bases:

>100_bases
CCGCTGGGCATCGCTGTTAGGGTTGGCGCAGCGGGCCGGAAAAGTCGTTTCCGGCGAGGGGCTTGTCGTGAAGGAAGTGC
AACGGGGCAAGGCGCGGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: ORF3 [H]

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MKMAAQKKIPLRKCVVTGEMKPKREMVRIVRSKEGDVSIDPTGKKAGRGAYITLDPECILQAKKKNILARHLKADIADAL
YDELLALAEKEKQVGYEK

Sequences:

>Translated_98_residues
MKMAAQKKIPLRKCVVTGEMKPKREMVRIVRSKEGDVSIDPTGKKAGRGAYITLDPECILQAKKKNILARHLKADIADAL
YDELLALAEKEKQVGYEK
>Mature_98_residues
MKMAAQKKIPLRKCVVTGEMKPKREMVRIVRSKEGDVSIDPTGKKAGRGAYITLDPECILQAKKKNILARHLKADIADAL
YDELLALAEKEKQVGYEK

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007393 [H]

Pfam domain/function: PF04296 DUF448 [H]

EC number: NA

Molecular weight: Translated: 10981; Mature: 10981

Theoretical pI: Translated: 10.22; Mature: 10.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMAAQKKIPLRKCVVTGEMKPKREMVRIVRSKEGDVSIDPTGKKAGRGAYITLDPECIL
CCCCCCCCCCHHHHEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECHHHHH
QAKKKNILARHLKADIADALYDELLALAEKEKQVGYEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKMAAQKKIPLRKCVVTGEMKPKREMVRIVRSKEGDVSIDPTGKKAGRGAYITLDPECIL
CCCCCCCCCCHHHHEECCCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEECHHHHH
QAKKKNILARHLKADIADALYDELLALAEKEKQVGYEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8491709; 9384377 [H]