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The map label for this gene is ybhR [H]

Identifier: 138894524

GI number: 138894524

Start: 929750

End: 930775

Strand: Direct

Name: ybhR [H]

Synonym: GTNG_0854

Alternate gene names: 138894524

Gene position: 929750-930775 (Clockwise)

Preceding gene: 138894523

Following gene: 138894525

Centisome position: 26.19

GC content: 50.1

Gene sequence:

>1026_bases
ATGAGAGTGATGGCGATTGTCGTTCGCATCATCCACCAGTTTTTCCGCGACAAACGGACGTTGGCGCTCATGATTGTCGC
GCCGATGTTCGTCTTGTTGTTAATGGATTTCGTGTTTAATGGCGAAAAATACACACCGGTGATTGCTGTCAGCGACAACG
TGCCTGATGCAGTTGTTGACAAGCTGAAAGAAGCGGGAGCGAACGTGAAAGAGCTGTCGGCAAAACAAGCGCGAAAACAA
CTGGACGATCAAGAGATTGACGCATGGCTTAACATGAACGGAAGCGCTCCGCACATTACGCTCGAAGGAAGCGACCCGAC
CGCCAATCAGGCGGCGCTGGCCACGGTGCAAAAGGCGTTCCAGTCGATGGTGCCCACCCCCTCATTTCAACTGAAAACAA
CGTATTGGCACGGGTCAAGCGACATGGCGTCTTTCGATTATTTCGGTCCAGTGTTGATTGGTGTTTTCATCTTCTTTTTC
GTCTTTTTGATTGCCGGGGTGTCATTTTTGCGTGAGCGGACGAACGGGACGCTCGAGCGGCTCATGGCGACGCCACTGCG
GCGCTGGGAGATAGTCGCCGGTTATATGATCGGATTTGGGCTGTTTACGACCGTTCAAGCCAGCTTGATTTCGTGGTTTG
CTATTGATGTGCTTGACATGATGATGGAAGGTTCATTCGGGTATGTGCTGATTATTACGTTTTTGCTAGCGATGACGGCG
CTTGCACTTGGGATGCTGTTATCAGCGTTTGCCAACAGCGAGCTGCAAATGATGCAGTTTATCCCGCTTGTTGTTATTCC
GCAAGTGTTTTTCTCTGGTTTGTTCAACCTTGATACAATGGAAGAATGGCTGCGTTCACTGAGTGTCGTCATGCCGCTTA
CGTACGGGGCAAACGCGTTGCGCGACATTATGGTGCGCGGCCAAGGATGGAGTACGATCGCTGCTGACATATACGTGCTG
CTTGGGTTTACGGTGTTGTTTATGGTATTAAATGTAGTAGCGTTGAAAAAATATCGCAAGCTGTAA

Upstream 100 bases:

>100_bases
ATGGCCGGTTGCTTGCCGTTGGACGCCCGGACGAGTTAAAGAGCGAAACTAAGTCGCAAACGCTCGAACAGGCATTTTTA
CATTTCGGGGGTGTCCATCA

Downstream 100 bases:

>100_bases
GGGGTAGAACAATGAGCGAGCATTCATGGATTCACGAGCTGCTGCAAATAGATGGAACAAAAGAAAAGTTCAGCGAAAAG
CAATTAAAAATTTTGGAAGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 341; Mature: 341

Protein sequence:

>341_residues
MRVMAIVVRIIHQFFRDKRTLALMIVAPMFVLLLMDFVFNGEKYTPVIAVSDNVPDAVVDKLKEAGANVKELSAKQARKQ
LDDQEIDAWLNMNGSAPHITLEGSDPTANQAALATVQKAFQSMVPTPSFQLKTTYWHGSSDMASFDYFGPVLIGVFIFFF
VFLIAGVSFLRERTNGTLERLMATPLRRWEIVAGYMIGFGLFTTVQASLISWFAIDVLDMMMEGSFGYVLIITFLLAMTA
LALGMLLSAFANSELQMMQFIPLVVIPQVFFSGLFNLDTMEEWLRSLSVVMPLTYGANALRDIMVRGQGWSTIAADIYVL
LGFTVLFMVLNVVALKKYRKL

Sequences:

>Translated_341_residues
MRVMAIVVRIIHQFFRDKRTLALMIVAPMFVLLLMDFVFNGEKYTPVIAVSDNVPDAVVDKLKEAGANVKELSAKQARKQ
LDDQEIDAWLNMNGSAPHITLEGSDPTANQAALATVQKAFQSMVPTPSFQLKTTYWHGSSDMASFDYFGPVLIGVFIFFF
VFLIAGVSFLRERTNGTLERLMATPLRRWEIVAGYMIGFGLFTTVQASLISWFAIDVLDMMMEGSFGYVLIITFLLAMTA
LALGMLLSAFANSELQMMQFIPLVVIPQVFFSGLFNLDTMEEWLRSLSVVMPLTYGANALRDIMVRGQGWSTIAADIYVL
LGFTVLFMVLNVVALKKYRKL
>Mature_341_residues
MRVMAIVVRIIHQFFRDKRTLALMIVAPMFVLLLMDFVFNGEKYTPVIAVSDNVPDAVVDKLKEAGANVKELSAKQARKQ
LDDQEIDAWLNMNGSAPHITLEGSDPTANQAALATVQKAFQSMVPTPSFQLKTTYWHGSSDMASFDYFGPVLIGVFIFFF
VFLIAGVSFLRERTNGTLERLMATPLRRWEIVAGYMIGFGLFTTVQASLISWFAIDVLDMMMEGSFGYVLIITFLLAMTA
LALGMLLSAFANSELQMMQFIPLVVIPQVFFSGLFNLDTMEEWLRSLSVVMPLTYGANALRDIMVRGQGWSTIAADIYVL
LGFTVLFMVLNVVALKKYRKL

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=351, Percent_Identity=21.0826210826211, Blast_Score=71, Evalue=9e-14,
Organism=Drosophila melanogaster, GI24650855, Length=315, Percent_Identity=23.4920634920635, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24650853, Length=315, Percent_Identity=23.4920634920635, Blast_Score=80, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 38175; Mature: 38175

Theoretical pI: Translated: 6.29; Mature: 6.29

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
6.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.2 %Met     (Mature Protein)
6.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVMAIVVRIIHQFFRDKRTLALMIVAPMFVLLLMDFVFNGEKYTPVIAVSDNVPDAVVD
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
KLKEAGANVKELSAKQARKQLDDQEIDAWLNMNGSAPHITLEGSDPTANQAALATVQKAF
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
QSMVPTPSFQLKTTYWHGSSDMASFDYFGPVLIGVFIFFFVFLIAGVSFLRERTNGTLER
HHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LMATPLRRWEIVAGYMIGFGLFTTVQASLISWFAIDVLDMMMEGSFGYVLIITFLLAMTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LALGMLLSAFANSELQMMQFIPLVVIPQVFFSGLFNLDTMEEWLRSLSVVMPLTYGANAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
RDIMVRGQGWSTIAADIYVLLGFTVLFMVLNVVALKKYRKL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRVMAIVVRIIHQFFRDKRTLALMIVAPMFVLLLMDFVFNGEKYTPVIAVSDNVPDAVVD
CHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH
KLKEAGANVKELSAKQARKQLDDQEIDAWLNMNGSAPHITLEGSDPTANQAALATVQKAF
HHHHCCCCHHHHHHHHHHHHCCHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
QSMVPTPSFQLKTTYWHGSSDMASFDYFGPVLIGVFIFFFVFLIAGVSFLRERTNGTLER
HHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
LMATPLRRWEIVAGYMIGFGLFTTVQASLISWFAIDVLDMMMEGSFGYVLIITFLLAMTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
LALGMLLSAFANSELQMMQFIPLVVIPQVFFSGLFNLDTMEEWLRSLSVVMPLTYGANAL
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHH
RDIMVRGQGWSTIAADIYVLLGFTVLFMVLNVVALKKYRKL
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]