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The map label for this gene is fixA [H]

Identifier: 138894454

GI number: 138894454

Start: 856949

End: 857764

Strand: Direct

Name: fixA [H]

Synonym: GTNG_0782

Alternate gene names: 138894454

Gene position: 856949-857764 (Clockwise)

Preceding gene: 138894453

Following gene: 138894455

Centisome position: 24.14

GC content: 49.02

Gene sequence:

>816_bases
ATGCTACATATTGTAGCCTGTATTAAGCAAGTGCCGGATACGAAGGTCGCCAAGATCAACCCGAAGACGAATACGATCGA
CCGCGCGAGCGCCCCGGCGATTTTAAACCCGTATGATGCGCATGCTGTAGAGGAAGCTGTCCGCTTGAAAAAAAGATATG
GCGGCGTCGTTTCCGTCTTGACGATGGGCCCGCCGCCGGCAGTAAAAGCGATTCGAAAGTGCATTGAGCTTGGTGCTGAT
GAAGGGTATATGATTTCCGACCGCGCGTTTGCCGGGGCGGATACGTTGGCGACGAGCTATGCGCTGGCGAAGGCGTTGGA
ACAAATCGCGAAACAACGGCCGATTGATTTGATTATTTGTGGAAAAATGACCATCGACGGTGATACAGGCCAAGTGGGGC
CAGGCATTGCCCGGCGTTTGGATATTCCGCCGCTCACTGGTGTGAACAAGGTCGTTGAAATTAACAAAGAAAAAGGATAT
GCGATTGTCCACCGCAAGCTCGAAGATGGTTATGAAGTCGTGAAGTCGACGCTCCCATGTTTATTCACGGTTGAAAAGGA
AATTAACGACATCTCCTTTGCACCTTTACCCAACATGATTAAAGCCGCACGATACTACCCGACAATTTGGACCGCAAACG
ATTTGGAAAACGTTGACCGCAAACAGTTAGGATTAAAAGGTTCCCCGACAATTGTTTCGAAAATATGGACACCACCAAAG
CCAAAAGGCGGTGAGATGCTCGAAGGGACGACAGAAGAAAAAGTAGAACAGCTGCTTTCGATCGTGCTTGAGAAAAAAGA
GTTGTTTCAATCGTAG

Upstream 100 bases:

>100_bases
TTGAACAAAATAGCAAAATATTTGACAAAAACTTCAGGAAATTTCTTGGCTGCGCTAGAATATGAATATAGGAAAATAAA
CCATTTTGGGAGGTGGATGT

Downstream 100 bases:

>100_bases
CAACGTTCCTGAACCTGCTTGGCTCGCTGCTAGGAGCGAAAAGGAATGTTTGATGTTCACAAGGAGGGGATAAAGTATGA
ACTTGGCTGATTACCAAGGG

Product: FixA protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 271

Protein sequence:

>271_residues
MLHIVACIKQVPDTKVAKINPKTNTIDRASAPAILNPYDAHAVEEAVRLKKRYGGVVSVLTMGPPPAVKAIRKCIELGAD
EGYMISDRAFAGADTLATSYALAKALEQIAKQRPIDLIICGKMTIDGDTGQVGPGIARRLDIPPLTGVNKVVEINKEKGY
AIVHRKLEDGYEVVKSTLPCLFTVEKEINDISFAPLPNMIKAARYYPTIWTANDLENVDRKQLGLKGSPTIVSKIWTPPK
PKGGEMLEGTTEEKVEQLLSIVLEKKELFQS

Sequences:

>Translated_271_residues
MLHIVACIKQVPDTKVAKINPKTNTIDRASAPAILNPYDAHAVEEAVRLKKRYGGVVSVLTMGPPPAVKAIRKCIELGAD
EGYMISDRAFAGADTLATSYALAKALEQIAKQRPIDLIICGKMTIDGDTGQVGPGIARRLDIPPLTGVNKVVEINKEKGY
AIVHRKLEDGYEVVKSTLPCLFTVEKEINDISFAPLPNMIKAARYYPTIWTANDLENVDRKQLGLKGSPTIVSKIWTPPK
PKGGEMLEGTTEEKVEQLLSIVLEKKELFQS
>Mature_271_residues
MLHIVACIKQVPDTKVAKINPKTNTIDRASAPAILNPYDAHAVEEAVRLKKRYGGVVSVLTMGPPPAVKAIRKCIELGAD
EGYMISDRAFAGADTLATSYALAKALEQIAKQRPIDLIICGKMTIDGDTGQVGPGIARRLDIPPLTGVNKVVEINKEKGY
AIVHRKLEDGYEVVKSTLPCLFTVEKEINDISFAPLPNMIKAARYYPTIWTANDLENVDRKQLGLKGSPTIVSKIWTPPK
PKGGEMLEGTTEEKVEQLLSIVLEKKELFQS

Specific function: May play a role in a redox process involved in nitrogen fixation [H]

COG id: COG2086

COG function: function code C; Electron transfer flavoprotein, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ETF beta-subunit/fixA family [H]

Homologues:

Organism=Homo sapiens, GI4503609, Length=263, Percent_Identity=30.7984790874525, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI62420877, Length=229, Percent_Identity=32.7510917030568, Blast_Score=84, Evalue=9e-17,
Organism=Escherichia coli, GI87081682, Length=259, Percent_Identity=26.6409266409266, Blast_Score=78, Evalue=6e-16,
Organism=Escherichia coli, GI2367123, Length=216, Percent_Identity=25.9259259259259, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25141345, Length=254, Percent_Identity=27.1653543307087, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6321646, Length=207, Percent_Identity=28.0193236714976, Blast_Score=86, Evalue=6e-18,
Organism=Drosophila melanogaster, GI24651147, Length=247, Percent_Identity=29.9595141700405, Blast_Score=88, Evalue=5e-18,
Organism=Drosophila melanogaster, GI24651145, Length=247, Percent_Identity=29.9595141700405, Blast_Score=88, Evalue=5e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000049
- InterPro:   IPR014730
- InterPro:   IPR012255
- InterPro:   IPR014729 [H]

Pfam domain/function: PF01012 ETF [H]

EC number: NA

Molecular weight: Translated: 29631; Mature: 29631

Theoretical pI: Translated: 8.82; Mature: 8.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHIVACIKQVPDTKVAKINPKTNTIDRASAPAILNPYDAHAVEEAVRLKKRYGGVVSVL
CHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEE
TMGPPPAVKAIRKCIELGADEGYMISDRAFAGADTLATSYALAKALEQIAKQRPIDLIIC
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GKMTIDGDTGQVGPGIARRLDIPPLTGVNKVVEINKEKGYAIVHRKLEDGYEVVKSTLPC
CCEEECCCCCCCCCCHHHHCCCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHCCE
LFTVEKEINDISFAPLPNMIKAARYYPTIWTANDLENVDRKQLGLKGSPTIVSKIWTPPK
EEEEHHHCCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCHHHHHCCCCCC
PKGGEMLEGTTEEKVEQLLSIVLEKKELFQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLHIVACIKQVPDTKVAKINPKTNTIDRASAPAILNPYDAHAVEEAVRLKKRYGGVVSVL
CHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEE
TMGPPPAVKAIRKCIELGADEGYMISDRAFAGADTLATSYALAKALEQIAKQRPIDLIIC
ECCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEE
GKMTIDGDTGQVGPGIARRLDIPPLTGVNKVVEINKEKGYAIVHRKLEDGYEVVKSTLPC
CCEEECCCCCCCCCCHHHHCCCCCCCCCCHHEEECCCCCEEEEHHHHHHHHHHHHHHCCE
LFTVEKEINDISFAPLPNMIKAARYYPTIWTANDLENVDRKQLGLKGSPTIVSKIWTPPK
EEEEHHHCCCCCCCCCHHHHHHHHHCCCEEECCCHHHHHHHHCCCCCCCHHHHHCCCCCC
PKGGEMLEGTTEEKVEQLLSIVLEKKELFQS
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA