| Definition | Geobacillus thermodenitrificans NG80-2 chromosome, complete genome. |
|---|---|
| Accession | NC_009328 |
| Length | 3,550,319 |
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The map label for this gene is manB [H]
Identifier: 138894012
GI number: 138894012
Start: 384567
End: 385976
Strand: Direct
Name: manB [H]
Synonym: GTNG_0338
Alternate gene names: 138894012
Gene position: 384567-385976 (Clockwise)
Preceding gene: 138894011
Following gene: 138894013
Centisome position: 10.83
GC content: 54.04
Gene sequence:
>1410_bases ATGAATACGTCGATAACGAAACCGTTCGCATGGCCAACACACGTATTTAAAGAGTATGACATTCGCGGGCGTGCCGGCGA GGAACTTGATGAGTCGTTTGCTTATTGGCTTGGACGGGCCTTTGCTGAAATGATGCAAAATGAGGGCGAACGGAAGGCGG TTGTTGCCCATGACAACCGCCTGTCGTCGCCGGCGCTGCATCGATCGTTGAAAAACGGGTTGCTTGATGGCGGCTGTGAT GTCATCGATATTGGGCTTTCGACGACACCGATGTTTTACTACAGCTTATACAACACGGACATTTCATGTGGCATGATCGT TACCGCAAGCCACAACCCAGGCGATGAGAACGGATTTAAAATCGCCATGGGAAAAACAACGATTTATGGCGAACGCATTC AAGCGCTGCGAAAGGCGATGGAGCGGCTAAGCCAACAACAGGCACAACCCGAAGTGACGCGGGGGCGTGAGGAAACGCTT GACCTGGTCCCGGCATATATCAAGATGTTGAAGGAGAAAATTCAGCTCGGTCCACGTCAGCTGAAAGTCGTTGTCGACTG CGGCAACGGCACCCCGTCGATCATTGCGCCAAAAGTGCTCAAAGAATGGGGCTGTGATGTCATCCCGCTCTATTGTGAAT CCGATCCGACGTTCCCGAATCACCATCCTGACCCGGTTGTGCCGGAAAACTTAGCTGATTTGATCAAAACGGTGCGCAAG GAGCAGGCGGATCTAGGCATCGCATTTGACGGTGACGGCGACCGGATCGGTATCGTGGATGAAACGGGCACGATCCGCTG GGGCGACCAACTGATGGTATTGTTCTGGCGTGATATTCTCAAGCGCCATCCGGGAGCTGAGGCGCCGGTTGAGGTAAAAT GTTCGCAAGCGCTCGTAGAAGAAATTGAGCGGCTCGGCGGCCGGCCGTTTTTCCACCGTACCGGTCATTCACACGTAAAA GCGACGTTGCGCCGCCGACCGGCCATTCCGTTTGCCGGCGAGATGTCCGGGCACTTATTCTTCAATGATGAATTTTATGG TTACGATGACGCCTTGTACGCTGCGGGACGGCTGCTTCGCCTCTTGTCGCATGACAAGCGCCCACTCTCTGAGTGGTTTG CTGATGTGCCGTATTATGTGGCGACGCCGGAAACGCGTGTCACCTGCCCAGAGGAGAAAAAACCGGTGGCCATCGACGCT GTGAAAAAACGGTTTGCCAGCCGTTATCCGGTCGTCGATGTCGACGGTGCTCGTATTCAATTCCGTGAAGGCTGGGGATT GGTGCGTCCTTCGAACACGCAACCGATTCTTGTCTTGCGCGCTGAAGCGAAGACGGAAGAAGCGTTGGCGGAGATTAAAC GGCAGTTGGCTGATTGTTTGCATACGCTCGAGCTTCACGTCAATTGGTAA
Upstream 100 bases:
>100_bases GGTCCGAACGGTCCGAACCCAAATCGAGGGGCGGAGTCAACACTATCATACTTATTAACAGCAGCAATCGCTCAATCGAT TTCGGTGGAGGTGGTTTTCG
Downstream 100 bases:
>100_bases CTTTGCTTTTGTCCAGATCGATGTGCCTACTTGTTCGTTATCTTAGATAGCAGCTATTTTTCCGGCGTCGGCCGCCCGTT CCATAGGGCGCCGCGCCGGA
Product: phosphomannomutase
Products: NA
Alternate protein names: PMM / PGM [H]
Number of amino acids: Translated: 469; Mature: 469
Protein sequence:
>469_residues MNTSITKPFAWPTHVFKEYDIRGRAGEELDESFAYWLGRAFAEMMQNEGERKAVVAHDNRLSSPALHRSLKNGLLDGGCD VIDIGLSTTPMFYYSLYNTDISCGMIVTASHNPGDENGFKIAMGKTTIYGERIQALRKAMERLSQQQAQPEVTRGREETL DLVPAYIKMLKEKIQLGPRQLKVVVDCGNGTPSIIAPKVLKEWGCDVIPLYCESDPTFPNHHPDPVVPENLADLIKTVRK EQADLGIAFDGDGDRIGIVDETGTIRWGDQLMVLFWRDILKRHPGAEAPVEVKCSQALVEEIERLGGRPFFHRTGHSHVK ATLRRRPAIPFAGEMSGHLFFNDEFYGYDDALYAAGRLLRLLSHDKRPLSEWFADVPYYVATPETRVTCPEEKKPVAIDA VKKRFASRYPVVDVDGARIQFREGWGLVRPSNTQPILVLRAEAKTEEALAEIKRQLADCLHTLELHVNW
Sequences:
>Translated_469_residues MNTSITKPFAWPTHVFKEYDIRGRAGEELDESFAYWLGRAFAEMMQNEGERKAVVAHDNRLSSPALHRSLKNGLLDGGCD VIDIGLSTTPMFYYSLYNTDISCGMIVTASHNPGDENGFKIAMGKTTIYGERIQALRKAMERLSQQQAQPEVTRGREETL DLVPAYIKMLKEKIQLGPRQLKVVVDCGNGTPSIIAPKVLKEWGCDVIPLYCESDPTFPNHHPDPVVPENLADLIKTVRK EQADLGIAFDGDGDRIGIVDETGTIRWGDQLMVLFWRDILKRHPGAEAPVEVKCSQALVEEIERLGGRPFFHRTGHSHVK ATLRRRPAIPFAGEMSGHLFFNDEFYGYDDALYAAGRLLRLLSHDKRPLSEWFADVPYYVATPETRVTCPEEKKPVAIDA VKKRFASRYPVVDVDGARIQFREGWGLVRPSNTQPILVLRAEAKTEEALAEIKRQLADCLHTLELHVNW >Mature_469_residues MNTSITKPFAWPTHVFKEYDIRGRAGEELDESFAYWLGRAFAEMMQNEGERKAVVAHDNRLSSPALHRSLKNGLLDGGCD VIDIGLSTTPMFYYSLYNTDISCGMIVTASHNPGDENGFKIAMGKTTIYGERIQALRKAMERLSQQQAQPEVTRGREETL DLVPAYIKMLKEKIQLGPRQLKVVVDCGNGTPSIIAPKVLKEWGCDVIPLYCESDPTFPNHHPDPVVPENLADLIKTVRK EQADLGIAFDGDGDRIGIVDETGTIRWGDQLMVLFWRDILKRHPGAEAPVEVKCSQALVEEIERLGGRPFFHRTGHSHVK ATLRRRPAIPFAGEMSGHLFFNDEFYGYDDALYAAGRLLRLLSHDKRPLSEWFADVPYYVATPETRVTCPEEKKPVAIDA VKKRFASRYPVVDVDGARIQFREGWGLVRPSNTQPILVLRAEAKTEEALAEIKRQLADCLHTLELHVNW
Specific function: The phosphomannomutase activity produces a precursor for alginate polymerization. The alginate layer causes a mucoid phenotype and provides a protective barrier against host immune defenses and antibiotics. Also involved in core-LPS biosynthesis due to it
COG id: COG1109
COG function: function code G; Phosphomannomutase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI290463102, Length=211, Percent_Identity=30.3317535545024, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI21361621, Length=211, Percent_Identity=30.3317535545024, Blast_Score=69, Evalue=1e-11, Organism=Escherichia coli, GI1788361, Length=450, Percent_Identity=33.7777777777778, Blast_Score=213, Evalue=3e-56, Organism=Escherichia coli, GI1789566, Length=456, Percent_Identity=27.6315789473684, Blast_Score=127, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.2; =5.4.2.8 [H]
Molecular weight: Translated: 52854; Mature: 52854
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: PS00710 PGM_PMM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTSITKPFAWPTHVFKEYDIRGRAGEELDESFAYWLGRAFAEMMQNEGERKAVVAHDNR CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC LSSPALHRSLKNGLLDGGCDVIDIGLSTTPMFYYSLYNTDISCGMIVTASHNPGDENGFK CCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCEE IAMGKTTIYGERIQALRKAMERLSQQQAQPEVTRGREETLDLVPAYIKMLKEKIQLGPRQ EEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE LKVVVDCGNGTPSIIAPKVLKEWGCDVIPLYCESDPTFPNHHPDPVVPENLADLIKTVRK EEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EQADLGIAFDGDGDRIGIVDETGTIRWGDQLMVLFWRDILKRHPGAEAPVEVKCSQALVE HHHCCEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH EIERLGGRPFFHRTGHSHVKATLRRRPAIPFAGEMSGHLFFNDEFYGYDDALYAAGRLLR HHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHH LLSHDKRPLSEWFADVPYYVATPETRVTCPEEKKPVAIDAVKKRFASRYPVVDVDGARIQ HHHCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEE FREGWGLVRPSNTQPILVLRAEAKTEEALAEIKRQLADCLHTLELHVNW EECCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECC >Mature Secondary Structure MNTSITKPFAWPTHVFKEYDIRGRAGEELDESFAYWLGRAFAEMMQNEGERKAVVAHDNR CCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCC LSSPALHRSLKNGLLDGGCDVIDIGLSTTPMFYYSLYNTDISCGMIVTASHNPGDENGFK CCCHHHHHHHHHCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCEE IAMGKTTIYGERIQALRKAMERLSQQQAQPEVTRGREETLDLVPAYIKMLKEKIQLGPRQ EEECCCCHHHHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCEE LKVVVDCGNGTPSIIAPKVLKEWGCDVIPLYCESDPTFPNHHPDPVVPENLADLIKTVRK EEEEEECCCCCCCCCCHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHH EQADLGIAFDGDGDRIGIVDETGTIRWGDQLMVLFWRDILKRHPGAEAPVEVKCSQALVE HHHCCEEEECCCCCEEEEEECCCCEEECCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHH EIERLGGRPFFHRTGHSHVKATLRRRPAIPFAGEMSGHLFFNDEFYGYDDALYAAGRLLR HHHHHCCCCCEECCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHH LLSHDKRPLSEWFADVPYYVATPETRVTCPEEKKPVAIDAVKKRFASRYPVVDVDGARIQ HHHCCCCCHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEECCCCEEE FREGWGLVRPSNTQPILVLRAEAKTEEALAEIKRQLADCLHTLELHVNW EECCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 1903398; 10984043; 7515870; 10481091; 8050998; 11716469; 11839312 [H]