Click here to switch to the map view.

The map label for this gene is nusG [H]

Identifier: 138893771

GI number: 138893771

Start: 108382

End: 108915

Strand: Direct

Name: nusG [H]

Synonym: GTNG_0092

Alternate gene names: 138893771

Gene position: 108382-108915 (Clockwise)

Preceding gene: 138893770

Following gene: 138893772

Centisome position: 3.05

GC content: 45.51

Gene sequence:

>534_bases
ATGGAGAAAAACTGGTATGTCGTCCATACATATTCAGGATACGAAAATAAAGTGAAAGCGAACTTGGAAAAACGTGTTGA
ATCAATGGGGATGCAAGATAAAATTTTCCGTGTTGTCGTCCCCGAGGAGACGGAGACGGACATTAAGAATGGAAAGCGGA
AAACGACGAAAAAGAAAGTGTTCCCTGGTTATGTGCTTGTTGAAATGGTCATGACCGACGATTCATGGTACGTTGTGCGC
AACACACCGGGCGTTACCGGGTTTGTCGGTTCAAGTGGAGCAGGTTCGAAACCGACACCGCTCATGGAAGAAGAAATAAA
ACTGATTTTAAAACGGATGGGCATGCCGCTCGCTGAGGTGGATGTCGACTACGAGGTGAACGAGACCGTCCGGATTAAAG
AAGGGCCATTTGCGAATTTCACTGGAAAAGTTGAAGCGATTGACCCTGATAAACAGAAAGTAAAACTGCTTGTCGACATG
TTCGGACGCGAAACGCGGGTGGAGCTGGAGTTTTCACAAATAGAAAAAATCTAA

Upstream 100 bases:

>100_bases
AATGATATGCTATAATGAAAGATAATCGTAAGAGTATGGAACCCGGCAACGGGTTTTTGTTTTGCATAAAAAATGAAAAC
CGCCCTAGGGAGGCTCGCTG

Downstream 100 bases:

>100_bases
TGGCAAAGAACTTGCAATCACTATTGAAAAGTGATAATATTTTAAAGTCAGTATGTCTTGGGTCTTAGACAAGGCATACA
GCGATGAACTTATACCCGCT

Product: transcription antitermination protein NusG

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 177; Mature: 177

Protein sequence:

>177_residues
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEETETDIKNGKRKTTKKKVFPGYVLVEMVMTDDSWYVVR
NTPGVTGFVGSSGAGSKPTPLMEEEIKLILKRMGMPLAEVDVDYEVNETVRIKEGPFANFTGKVEAIDPDKQKVKLLVDM
FGRETRVELEFSQIEKI

Sequences:

>Translated_177_residues
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEETETDIKNGKRKTTKKKVFPGYVLVEMVMTDDSWYVVR
NTPGVTGFVGSSGAGSKPTPLMEEEIKLILKRMGMPLAEVDVDYEVNETVRIKEGPFANFTGKVEAIDPDKQKVKLLVDM
FGRETRVELEFSQIEKI
>Mature_177_residues
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEETETDIKNGKRKTTKKKVFPGYVLVEMVMTDDSWYVVR
NTPGVTGFVGSSGAGSKPTPLMEEEIKLILKRMGMPLAEVDVDYEVNETVRIKEGPFANFTGKVEAIDPDKQKVKLLVDM
FGRETRVELEFSQIEKI

Specific function: Influences transcription termination and antitermination. Acts as a component of the transcription complex, and interacts with the termination factor rho and RNA polymerase [H]

COG id: COG0250

COG function: function code K; Transcription antiterminator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KOW domain [H]

Homologues:

Organism=Escherichia coli, GI1790414, Length=177, Percent_Identity=41.8079096045198, Blast_Score=152, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005824
- InterPro:   IPR001062
- InterPro:   IPR015869
- InterPro:   IPR006645
- InterPro:   IPR014722
- InterPro:   IPR008991 [H]

Pfam domain/function: PF00467 KOW; PF02357 NusG [H]

EC number: NA

Molecular weight: Translated: 20233; Mature: 20233

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEETETDIKNGKRKTTKKKV
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHC
FPGYVLVEMVMTDDSWYVVRNTPGVTGFVGSSGAGSKPTPLMEEEIKLILKRMGMPLAEV
CCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHE
DVDYEVNETVRIKEGPFANFTGKVEAIDPDKQKVKLLVDMFGRETRVELEFSQIEKI
ECCEECCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHCCC
>Mature Secondary Structure
MEKNWYVVHTYSGYENKVKANLEKRVESMGMQDKIFRVVVPEETETDIKNGKRKTTKKKV
CCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHCCCCCCCHHHC
FPGYVLVEMVMTDDSWYVVRNTPGVTGFVGSSGAGSKPTPLMEEEIKLILKRMGMPLAEV
CCCEEEEEEEEECCCEEEEECCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEHE
DVDYEVNETVRIKEGPFANFTGKVEAIDPDKQKVKLLVDMFGRETRVELEFSQIEKI
ECCEECCCEEEECCCCCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7968510; 9384377 [H]