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The map label for this gene is yabS [H]

Identifier: 138893737

GI number: 138893737

Start: 69984

End: 70724

Strand: Direct

Name: yabS [H]

Synonym: GTNG_0058

Alternate gene names: 138893737

Gene position: 69984-70724 (Clockwise)

Preceding gene: 138893736

Following gene: 138893738

Centisome position: 1.97

GC content: 53.44

Gene sequence:

>741_bases
ATGCGAAAGGGAACGTTGCGGCAGATTTTGCTCATTACCGACGGCTGCTCCAACCATGGCGAGGATCCAGCCGCCATGGC
GGCATTGGCGAGGGAACAGGGCATTACAGTGAACGTGATTGGTGTATTGGACCAAGACACGATCGATGAAAATGGGCAGC
GAGAAATTGAAGCGATTGCGGCCGCTGGCGGCGGGATGAGCCAGGTCGTATATGCGAGGCAGCTGTCGCAAACGGTGCAG
ATGGTGACGCGCCAAGCGATGACCCAGACGTTGCAAGGGCTGGTCAACCGAGAATTAAAACAAATATTTGGTTCGGACGT
TTCGCTCGAAGACTTGCCTCCGGACAAGCGCGGTCAAGTGATGGAAGTCGTCGATGAACTTGGAGAAACGGCTGCGCTCG
ACGTGCTTATTTTAATCGATACGAGCGGGAGCATGAAGACGAAATTGCCGACGGTCAAAGAGGCGCTCGTCGATTTATCG
CTTAGTTTAAATGCACGCATGGGTGAGAACCGTTTTTCCGTCTTCATCTTTCCAGGAAAGCGGCAACATGCCGAGAAAAT
GATTGACTGGACGCCGAGGATTGAGGAGCTGTCCACCATCTTTCCGAAATTGGCGTCAGGTGGGTTGACGCCAACAGGAC
CGGCGCTGCGCGAAGCGATCGCCCATTTCGACCGCAAACGGTCACTAAGGAGCTGGATTGGTAATGGCGATGAGCCATAC
ATTGAAGAATCGTCTTTGTAA

Upstream 100 bases:

>100_bases
TCCGGCATATATGTATATGAAAAAGGCGCAGTAGTACGCGTATAAAAACGTTCTCCCGCGGCGATGATGGTAATACATTC
CGCTGAGGAGGGGAACGAAG

Downstream 100 bases:

>100_bases
TCTTCCGCCTGGCACGGTTGTTACCGGCAAATGGCACGGCCGTTCATACCGGCTTTTGCGGCGGCTCGGCAGTGGAGCAA
ACGGCGTCGTCTACTTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRKGTLRQILLITDGCSNHGEDPAAMAALAREQGITVNVIGVLDQDTIDENGQREIEAIAAAGGGMSQVVYARQLSQTVQ
MVTRQAMTQTLQGLVNRELKQIFGSDVSLEDLPPDKRGQVMEVVDELGETAALDVLILIDTSGSMKTKLPTVKEALVDLS
LSLNARMGENRFSVFIFPGKRQHAEKMIDWTPRIEELSTIFPKLASGGLTPTGPALREAIAHFDRKRSLRSWIGNGDEPY
IEESSL

Sequences:

>Translated_246_residues
MRKGTLRQILLITDGCSNHGEDPAAMAALAREQGITVNVIGVLDQDTIDENGQREIEAIAAAGGGMSQVVYARQLSQTVQ
MVTRQAMTQTLQGLVNRELKQIFGSDVSLEDLPPDKRGQVMEVVDELGETAALDVLILIDTSGSMKTKLPTVKEALVDLS
LSLNARMGENRFSVFIFPGKRQHAEKMIDWTPRIEELSTIFPKLASGGLTPTGPALREAIAHFDRKRSLRSWIGNGDEPY
IEESSL
>Mature_246_residues
MRKGTLRQILLITDGCSNHGEDPAAMAALAREQGITVNVIGVLDQDTIDENGQREIEAIAAAGGGMSQVVYARQLSQTVQ
MVTRQAMTQTLQGLVNRELKQIFGSDVSLEDLPPDKRGQVMEVVDELGETAALDVLILIDTSGSMKTKLPTVKEALVDLS
LSLNARMGENRFSVFIFPGKRQHAEKMIDWTPRIEELSTIFPKLASGGLTPTGPALREAIAHFDRKRSLRSWIGNGDEPY
IEESSL

Specific function: Unknown

COG id: COG2304

COG function: function code R; Uncharacterized protein containing a von Willebrand factor type A (vWA) domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002035 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26902; Mature: 26902

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS50234 VWFA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKGTLRQILLITDGCSNHGEDPAAMAALAREQGITVNVIGVLDQDTIDENGQREIEAIA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH
AAGGGMSQVVYARQLSQTVQMVTRQAMTQTLQGLVNRELKQIFGSDVSLEDLPPDKRGQV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MEVVDELGETAALDVLILIDTSGSMKTKLPTVKEALVDLSLSLNARMGENRFSVFIFPGK
HHHHHHHCCHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
RQHAEKMIDWTPRIEELSTIFPKLASGGLTPTGPALREAIAHFDRKRSLRSWIGNGDEPY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
IEESSL
CCCCCC
>Mature Secondary Structure
MRKGTLRQILLITDGCSNHGEDPAAMAALAREQGITVNVIGVLDQDTIDENGQREIEAIA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEEEECCCCCCCCCCHHHHHHHH
AAGGGMSQVVYARQLSQTVQMVTRQAMTQTLQGLVNRELKQIFGSDVSLEDLPPDKRGQV
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
MEVVDELGETAALDVLILIDTSGSMKTKLPTVKEALVDLSLSLNARMGENRFSVFIFPGK
HHHHHHHCCHHHEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCC
RQHAEKMIDWTPRIEELSTIFPKLASGGLTPTGPALREAIAHFDRKRSLRSWIGNGDEPY
HHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
IEESSL
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]