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The map label for this gene is rpmB

Identifier: 13508363

GI number: 13508363

Start: 751224

End: 751421

Strand: Direct

Name: rpmB

Synonym: MPN624

Alternate gene names: 13508363

Gene position: 751224-751421 (Clockwise)

Preceding gene: 13508362

Following gene: 13508364

Centisome position: 92.02

GC content: 44.44

Gene sequence:

>198_bases
ATGGCAAAAAAAGACCAACTTACTTTAAGAGGGCCTTTGTATGGCAACAATCGTTCCCACTCCAAGACTATTACGCGCAG
AAAGTGGAATGTTAACCTCCAACCATGCAAGGTCAAAACTGCTGATGGCAAGACCACCAGAATCTTAGTTTCTACCAGAA
CACTGCGCACCTTAAAGAAACACAACCGCCTCTCTTAG

Upstream 100 bases:

>100_bases
TAAAAGCCGGATGCGTCAACCTGAGCGGGACATGCAAAAGAACAAATTGCATGACAGTGATTGACAAAGCAATATGTAAG
CTTTGTTACAATTATTTGAT

Downstream 100 bases:

>100_bases
TGGCGCGCTAGAGTTAAATTAAACTTAAATCCATATAGTAAATATGGACAAAAAGTACGACATCACTGCTGTTTTAAACG
AAGACAGCTCCATGACTGCC

Product: 50S ribosomal protein L28

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 65; Mature: 64

Protein sequence:

>65_residues
MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKKHNRLS

Sequences:

>Translated_65_residues
MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKKHNRLS
>Mature_64_residues
AKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKKHNRLS

Specific function: Unknown

COG id: COG0227

COG function: function code J; Ribosomal protein L28

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L28P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL28_MYCPN (P75171)

Other databases:

- EMBL:   U00089
- PIR:   S73544
- RefSeq:   NP_110313.1
- ProteinModelPortal:   P75171
- SMR:   P75171
- GeneID:   877270
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN624
- HOGENOM:   HBG597003
- OMA:   GPLSGNN
- ProtClustDB:   PRK00359
- BioCyc:   MPNE272634:MPN624-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00373
- InterPro:   IPR001383
- TIGRFAMs:   TIGR00009

Pfam domain/function: PF00830 Ribosomal_L28

EC number: NA

Molecular weight: Translated: 7531; Mature: 7400

Theoretical pI: Translated: 12.34; Mature: 12.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKK
CCCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEHHHHHHHHH
HNRLS
CCCCC
>Mature Secondary Structure 
AKKDQLTLRGPLYGNNRSHSKTITRRKWNVNLQPCKVKTADGKTTRILVSTRTLRTLKK
CCCCCEEEECCCCCCCCCCCCEEEEEECCCCCCCCEEEECCCCEEEEEEEHHHHHHHHH
HNRLS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633