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The map label for this gene is rpsU [H]

Identifier: 13508035

GI number: 13508035

Start: 351728

End: 351910

Strand: Direct

Name: rpsU [H]

Synonym: MPN296

Alternate gene names: 13508035

Gene position: 351728-351910 (Clockwise)

Preceding gene: 13508034

Following gene: 13508036

Centisome position: 43.08

GC content: 40.44

Gene sequence:

>183_bases
ATGCCAAAGATTGAAGTTAAAAACGATGATTTAGAGTTAGCTTTAAAAAAGTTTAAACGGGTTTCGCTAGAAATTCGCCG
TTTAGCACAGCGTCACGAATACCACCTTCGAAAAGGAATGCGCTTGCGTGAAAAGCGAAAGATTGCGCAGAAGAAACGCC
GTAAGTTTCGTAATATGGTCTAG

Upstream 100 bases:

>100_bases
GTGAGTCTAAGAGTATTAAGGTAACCAATGCAGTAACCTTACCAAGTGATGATTTAGATAAAGAGCTGTTTGAATTTAGC
GGGGAAGGGGGTGATGAATA

Downstream 100 bases:

>100_bases
TTACTAGCACCTTACCAGTTTTATATGGATAACGATAAAAAGGATAAGATTATTTTGAGTGGTGAGTTAACTAACCATCG
CTTTAATTTTACCAAGGATG

Product: 30S ribosomal protein S21

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 60; Mature: 59

Protein sequence:

>60_residues
MPKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV

Sequences:

>Translated_60_residues
MPKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV
>Mature_59_residues
PKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV

Specific function: Unknown

COG id: COG0828

COG function: function code J; Ribosomal protein S21

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S21P family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001911 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7515; Mature: 7384

Theoretical pI: Translated: 12.00; Mature: 12.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PKIEVKNDDLELALKKFKRVSLEIRRLAQRHEYHLRKGMRLREKRKIAQKKRRKFRNMV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]