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The map label for this gene is ysr1

Identifier: 13508008

GI number: 13508008

Start: 319703

End: 321184

Strand: Direct

Name: ysr1

Synonym: MPN269

Alternate gene names: NA

Gene position: 319703-321184 (Clockwise)

Preceding gene: 13508007

Following gene: 13508009

Centisome position: 39.16

GC content: 35.96

Gene sequence:

>1482_bases
ATGAGCGCTAAGTTAACGTTAGAAAGCATTGCAAAAACATTTGCCGAAACATCGATCTTTGCGATCTTGTTTTTAATTAT
TGTCATCCTCAATTTAGGTTTACTTGTTTTTTTAGCGTATCAGTACCGTGTTTACAAAAAGAAGCAAAGAGCAAACCTCA
CCAAGCAGACTTATAACAATGACTATGGCCAAATTGTTAATTTAAAACAGCAAAACGGTGCCAAGATAAAGGAGCTTGCT
AACTTAAAAGATCAGTTAAGTGAATTAGGCCAAAAATTTAACACCACACTGAGTGAAATCATTAACAAACCACTTGTCAA
TGTGATTGATGAATACTTGGATGAACAGTTTAAACAAGCTGCTAATTTTCGTGAAGCAGAACTTAATGCCGTTTTAGATA
GTAATGACCAGAAAACAGTGTTCCATAAGCGTTTGTTCAATAAATTTCACTTTGGTGTCGACAAGCTAGCTAATATTAAT
GTCAAAAATCCGCTCAATTTATGCTGGGTTGACAGCGCTAGTTTTACCGTGATTGAAAGTGATTTCCGCAAACTTAATGG
TGTTGGCGGGATTAATAAAAAGTTGTTAATTGAAAAGTTAAGGATTGAAGATATTATCTTTACCAATATCGATAAGAAGT
ACTATGAGGTACAGATACTATCTGACTCGCCAGTAAAGGTACAAAAAACAGTGTTAACTATTCGCAACATCTTGATTAAT
GATTACGTGGACAATGAAAAAATTGAGTCATATGCTAGGGAAGCTAACGGTTACTTCAATGACCACTGTAAACTGATTGG
TAAGCAGGTGTTAGAACGACTCAATATCTTTGAAATTAGCCCTAAACTACACAAGTTTTTTGGTTTATTAGCGTTTCGTT
ATTCTTTCGGTCAAAACGTTTTATCACACTGTCTGGAAACTGGTTTTCTCACCGCTTACCTAGCGCTTTTAGTTAACTTT
AAACCTGATGTTGCATTAAAGTGCGGTTTGTATCATGATATTGGTAAAGCGGATGATGAAAACGGGAAGAAGAACCACAC
GGTTACAGGTGCCAAGATCGGTGATGAATTTTACTTTGAAAACGATGTCAAATACACAATTGCCAACCACCATAATAAAA
ATGTCGATAACGTATACTGTCGTTTAACTCAAATTGGCGATAAGCTTTCAGCAGGGCGTTTGGGTGCGCGCTCTGACAGT
TCGGTTTTATTTAGCCAACTCAAACAAGAATTAAAGCAAATTGTGGAAGAAACACTAGCACAATTTAAAACAACCATCCT
TTTAGGACAAAGTGGACGCCGATTAGTAATTTGATTGGAAACCAACCAGCACAATAACATTATTGACAACCAACAGTTAA
CTGATTTGGCTACTACCATTAAAAGCAAAATCGTGCAAAACAACATTACTAATCGCTTTCCAATTAAGGTAGTATTACGC
TATAACTTCGAACACAGCTTTGATACAAAGGACAAGAACTAG

Upstream 100 bases:

>100_bases
GCTTTGCAAAAGCTTGGAATTAAAGGGATTAATAAGAGTCAGAACCAGTACCGCTTTGTATTGGGCAATTTTGTCAATCA
ATTAAAACAGCAAATTGAAA

Downstream 100 bases:

>100_bases
TTATGCAATACACCGTTTTAATTCCACTGTTTATTTTTATAGGAGCCATGGTGTTGTTTGGTTTTAGCTTTCAGAAAAAG
CAACCACAACGCCGCATCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 493; Mature: 492

Protein sequence:

>493_residues
MSAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNNDYGQIVNLKQQNGAKIKELA
NLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQAANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANIN
VKNPLNLCWVDSASFTVIESDFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIN
DYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNVLSHCLETGFLTAYLALLVNF
KPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDS
SVLFSQLKQELKQIVEETLAQFKTTILLGQSGRRLVIWLETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLR
YNFEHSFDTKDKN

Sequences:

>Translated_493_residues
MSAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNNDYGQIVNLKQQNGAKIKELA
NLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQAANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANIN
VKNPLNLCWVDSASFTVIESDFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIN
DYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNVLSHCLETGFLTAYLALLVNF
KPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDS
SVLFSQLKQELKQIVEETLAQFKTTILLGQSGRRLVI*LETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLR
YNFEHSFDTKDKN
>Mature_492_residues
SAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNNDYGQIVNLKQQNGAKIKELAN
LKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQAANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANINV
KNPLNLCWVDSASFTVIESDFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIND
YVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNVLSHCLETGFLTAYLALLVNFK
PDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFENDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDSS
VLFSQLKQELKQIVEETLAQFKTTILLGQSGRRLVI*LETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLRY
NFEHSFDTKDKN

Specific function: Catalyzes the hydrolysis of both 2',3'-cyclic AMP and 2',3'-cyclic GMP into 3'-AMP and 3'-GMP, respectively, at the 3'- terminal of RNA [H]

COG id: COG1418

COG function: function code R; Predicted HD superfamily hydrolase

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017705
- InterPro:   IPR003607
- InterPro:   IPR006675 [H]

Pfam domain/function: NA

EC number: =3.1.4.16 [H]

Molecular weight: Translated: 56323; Mature: 56192

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNN
CCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
DYGQIVNLKQQNGAKIKELANLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQA
CCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANINVKNPLNLCWVDSASFTVIES
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCEEEEHH
DFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIN
HHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
DYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHH
LSHCLETGFLTAYLALLVNFKPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFE
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCCCCEEECCEECCCCEEC
NDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDSSVLFSQLKQELKQIVEETLA
CCCEEEEECCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QFKTTILLGQSGRRLVILETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLRY
HHHHHEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
NFEHSFDTKDKN
CCCCCCCCCCCC
>Mature Secondary Structure 
SAKLTLESIAKTFAETSIFAILFLIIVILNLGLLVFLAYQYRVYKKKQRANLTKQTYNN
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
DYGQIVNLKQQNGAKIKELANLKDQLSELGQKFNTTLSEIINKPLVNVIDEYLDEQFKQA
CCHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
ANFREAELNAVLDSNDQKTVFHKRLFNKFHFGVDKLANINVKNPLNLCWVDSASFTVIES
CCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEECCCCEEEEHH
DFRKLNGVGGINKKLLIEKLRIEDIIFTNIDKKYYEVQILSDSPVKVQKTVLTIRNILIN
HHHHHCCCCCCCHHHHHHHHHHHHHHEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHH
DYVDNEKIESYAREANGYFNDHCKLIGKQVLERLNIFEISPKLHKFFGLLAFRYSFGQNV
HCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHHH
LSHCLETGFLTAYLALLVNFKPDVALKCGLYHDIGKADDENGKKNHTVTGAKIGDEFYFE
HHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCCCCEEECCEECCCCEEC
NDVKYTIANHHNKNVDNVYCRLTQIGDKLSAGRLGARSDSSVLFSQLKQELKQIVEETLA
CCCEEEEECCCCCCHHHHHHHHHHHCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
QFKTTILLGQSGRRLVILETNQHNNIIDNQQLTDLATTIKSKIVQNNITNRFPIKVVLRY
HHHHHEEECCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
NFEHSFDTKDKN
CCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]