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The map label for this gene is ptc1

Identifier: 13507986

GI number: 13507986

Start: 298329

End: 299108

Strand: Direct

Name: ptc1

Synonym: MPN247

Alternate gene names: NA

Gene position: 298329-299108 (Clockwise)

Preceding gene: 13507985

Following gene: 13507987

Centisome position: 36.54

GC content: 41.15

Gene sequence:

>780_bases
ATGGACAGCACCAACCAAAACCTGTTCGCGTCATTGTCCAAAAAAGGACCCGTTCGCAAAGAAAATCAGGACTTTAGTGT
TGTTACTTTCAACCGCTTTGGTCAGTTAATGAGCCTTGTTTGTGATGGTTTAGGCGGTTATAAGGGCGGTAAGATGGCTA
GTGCCTTGGTGAGTGAAGTTTTTACCAAGTCCTTTACAGTCTTTGATTTTCATAGTCAAACTGAAAGGGCAGTGAAACAG
TGGTTTGAAATTACTTTAATTGAAGCGCGGCGCACCTTAGAACAGTACTTTCAAACAATTAAACGTAACCAAGTCCAGTT
TGCGCGAATGGCGACTACCTTAGTGTTGAGTATTATAAGTAAGCAAAACATTTGAACCTTTTGGGTGGGTGATTCACGTG
CTTATTTAATTAACAGTTACCAAAGCTTGCAAATTACCGAAGACCATAACCTGTACAACCAACTGTTACAGATGCACGCT
ACCCCTGATGTGATTGCCTCTTATAAAGACAAGCTGTTAGCCCTCACTGCTACCGTTTCCAAAGATCAGGAACGCCAGTT
GAAATACAGCTTTAGGTGTGATGTAGTAAACGCTTGGGACTTTTTACTGTTGTGCTCTGATGGTCTGTACAACTTCTTGG
ATCCCAACTGCTTTTATGAGGTCATTACTAGTGCACCTAACCTCAAAAAGGCCGTTACACAACTAGCAAAGTTGAGCTTG
GATAACGCTAGTAATGACAACATTACGCTCAACTTGATTAATTTAAAACAATGGCACTAA

Upstream 100 bases:

>100_bases
AATGTCAACAAATTGGTCACTTTAAGTATGTGGTTACCAACAACGAGTTTGACAAGACCTTAGCGGAGTTACAAGCAATT
TTACTAGCTGAATTTAATTA

Downstream 100 bases:

>100_bases
ATTTAAAGATTGGTGACATTGTCCAAAACAAGTACCGGATTGAAAAGCTAATCAACCGTGGCGGGATGAACTCTTACCTG
TTTTTAGCGAGCAACCTCCA

Product: protein phoshatase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MDSTNQNLFASLSKKGPVRKENQDFSVVTFNRFGQLMSLVCDGLGGYKGGKMASALVSEVFTKSFTVFDFHSQTERAVKQ
WFEITLIEARRTLEQYFQTIKRNQVQFARMATTLVLSIISKQNIWTFWVGDSRAYLINSYQSLQITEDHNLYNQLLQMHA
TPDVIASYKDKLLALTATVSKDQERQLKYSFRCDVVNAWDFLLLCSDGLYNFLDPNCFYEVITSAPNLKKAVTQLAKLSL
DNASNDNITLNLINLKQWH

Sequences:

>Translated_259_residues
MDSTNQNLFASLSKKGPVRKENQDFSVVTFNRFGQLMSLVCDGLGGYKGGKMASALVSEVFTKSFTVFDFHSQTERAVKQ
WFEITLIEARRTLEQYFQTIKRNQVQFARMATTLVLSIISKQNI*TFWVGDSRAYLINSYQSLQITEDHNLYNQLLQMHA
TPDVIASYKDKLLALTATVSKDQERQLKYSFRCDVVNAWDFLLLCSDGLYNFLDPNCFYEVITSAPNLKKAVTQLAKLSL
DNASNDNITLNLINLKQWH
>Mature_259_residues
MDSTNQNLFASLSKKGPVRKENQDFSVVTFNRFGQLMSLVCDGLGGYKGGKMASALVSEVFTKSFTVFDFHSQTERAVKQ
WFEITLIEARRTLEQYFQTIKRNQVQFARMATTLVLSIISKQNI*TFWVGDSRAYLINSYQSLQITEDHNLYNQLLQMHA
TPDVIASYKDKLLALTATVSKDQERQLKYSFRCDVVNAWDFLLLCSDGLYNFLDPNCFYEVITSAPNLKKAVTQLAKLSL
DNASNDNITLNLINLKQWH

Specific function: Unknown

COG id: COG0631

COG function: function code T; Serine/threonine protein phosphatase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PP2C-like domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015655
- InterPro:   IPR001932
- InterPro:   IPR014045 [H]

Pfam domain/function: PF00481 PP2C [H]

EC number: =3.1.3.16 [H]

Molecular weight: Translated: 29485; Mature: 29485

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSTNQNLFASLSKKGPVRKENQDFSVVTFNRFGQLMSLVCDGLGGYKGGKMASALVSEV
CCCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FTKSFTVFDFHSQTERAVKQWFEITLIEARRTLEQYFQTIKRNQVQFARMATTLVLSIIS
HHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQNITFWVGDSRAYLINSYQSLQITEDHNLYNQLLQMHATPDVIASYKDKLLALTATVSK
CCCEEEEECCCEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEHHCC
DQERQLKYSFRCDVVNAWDFLLLCSDGLYNFLDPNCFYEVITSAPNLKKAVTQLAKLSLD
CHHHHHHHHEEECEECHHHEEEECCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
NASNDNITLNLINLKQWH
CCCCCCEEEEEEECCCCC
>Mature Secondary Structure
MDSTNQNLFASLSKKGPVRKENQDFSVVTFNRFGQLMSLVCDGLGGYKGGKMASALVSEV
CCCCCCHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
FTKSFTVFDFHSQTERAVKQWFEITLIEARRTLEQYFQTIKRNQVQFARMATTLVLSIIS
HHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KQNITFWVGDSRAYLINSYQSLQITEDHNLYNQLLQMHATPDVIASYKDKLLALTATVSK
CCCEEEEECCCEEEEEECCCEEEEECCHHHHHHHHHHCCCHHHHHHHHHHHEEEEEHHCC
DQERQLKYSFRCDVVNAWDFLLLCSDGLYNFLDPNCFYEVITSAPNLKKAVTQLAKLSLD
CHHHHHHHHEEECEECHHHEEEECCCCCHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHCC
NASNDNITLNLINLKQWH
CCCCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633 [H]