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The map label for this gene is rpsN [H]

Identifier: 13507917

GI number: 13507917

Start: 224882

End: 225067

Strand: Direct

Name: rpsN [H]

Synonym: MPN178

Alternate gene names: 13507917

Gene position: 224882-225067 (Clockwise)

Preceding gene: 13507916

Following gene: 13507918

Centisome position: 27.55

GC content: 46.77

Gene sequence:

>186_bases
ATGGCCAAAAAATCATTAAAAGTAAAACAAACTAGAATCCCCAAATTTGCCGTACGGGCTTACACCCGCTGTCAGCGTTG
TGGTCGAGCCCGGGCAGTTTTAAGCCACTTTGGTGTGTGCCGTTTGTGCTTCCGCGAACTAGCATACGCTGGCGCAATTC
CAGGAGTTAAAAAAGCATCATGATAA

Upstream 100 bases:

>100_bases
ATCCGCGGGTTTGACGTTACTCTGGTAACTTCAACCAATAAGGACAGCGAAGCATTAGCTTTACTTAGAGCGTTAAACCT
CCCACTTGTAAAAGGATAAT

Downstream 100 bases:

>100_bases
CAACTACAAAACCAATTAAAGCCCACTTTGATCCAGTGGCTGACTTACTAACGAAGATTAACAATGCGCGCAAAGCGAAG
TTAATGACGGTAACCACAAT

Product: 30S ribosomal protein S14

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 61; Mature: 60

Protein sequence:

>61_residues
MAKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKASW

Sequences:

>Translated_61_residues
MAKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKAS*
>Mature_60_residues
AKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKAS*

Specific function: Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site [H]

COG id: COG0199

COG function: function code J; Ribosomal protein S14

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein S14P family. Zinc- binding S14P subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001209
- InterPro:   IPR018271
- InterPro:   IPR023053 [H]

Pfam domain/function: PF00253 Ribosomal_S14 [H]

EC number: NA

Molecular weight: Translated: 6681; Mature: 6550

Theoretical pI: Translated: 11.63; Mature: 11.63

Prosite motif: PS00527 RIBOSOMAL_S14

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
8.2 %Cys+Met (Translated Protein)
6.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKAS
CCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKKSLKVKQTRIPKFAVRAYTRCQRCGRARAVLSHFGVCRLCFRELAYAGAIPGVKKAS
CCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7569993 [H]