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The map label for this gene is ugpC [C]

Identifier: 13507873

GI number: 13507873

Start: 173206

End: 174966

Strand: Direct

Name: ugpC [C]

Synonym: MPN134

Alternate gene names: 13507873

Gene position: 173206-174966 (Clockwise)

Preceding gene: 13507872

Following gene: 13507874

Centisome position: 21.22

GC content: 41.28

Gene sequence:

>1761_bases
ATGGAAAAGATACAAGCGGAAAAATCCCAAAGTGCAATTGAGTTTAAGAATATTGTAGTCGACTTTGGTGAGTCAATCGC
AATTGATAACATTAACCTCACGGTTAAAAAGAAGGAGTTAGTTACCTTACTAGGTCCTTCTGGGTGTGGGAAAACAACTT
CGCTTTCCGTGATTGCGGGTCTTATCGCCCCTACTAGTGGTCAGGTTTTATTTAATGGTTATGATGTCACAAAAAAGCCA
CCACAACAACGCAAACTGGGATTAGTGTTCCAAAACTATGCCTTGTATCCGCACATGAGTGTGTTTGAAAACATTGTCTT
CCCACTCTACAGTGATACGTCTTGACGCGAAGCCATCTTTGAAAAAAATACCTGAGCGCAACACGACATTAATTGCTTGA
TCTTAAAGGCTAATGGTGCTACTAGTGAGGAGCTGGCAGAGCTCAATCGTTTAATGCAACAACGAATCGATGAGCCCAAA
CGAATGGCTTACCAGATTAATGATTTGATGGTAAGTGTGTTTCAAAAACAGAGTGAACTGGAAGCTAACCTAAAGTTAAT
TCCCCGCAAAAAACAGTTTGCCATTATTTCACTCAGCAAGGAAACACTAAGTCAAATAAGGGATGTTGAAACTAAAGCCA
AGGCTGCATTGGAAACCGCTGATAGTGCTGAAGTGGAGCAGACCATTAAAAGTGAACTTAAGCAAAAACTAAGTGAAATT
AAGGCTAATTACCACGATGAAAAGGCCAACATTAAAGCTTACTGATGGGAAATGTTGGCCAATATTAAGACCGAATTAAA
AACCGAAAAAACTGCCATTAAGCAAACTAATGACTATGCCAAATTGAAGGAATTGAAGTGAAAGATCCACTTTGAACCCT
TGAATTTAAAGAAGCAGTACCGCAGTTACTTTAAACAACTAAAAGCCAAATACAGCTTAAAAGATGGCAATTTAACTGAA
AGCGAATTAAGTCAAATTGAGGAGTTGCAAAAACGGATTGTTTCGCTCAAAGATTTCATTAACCGCACTGCTAAAGAAGT
AGCTGAAAAACTGGAAATTACTAAGATTCTCCACAAGCGCCCCGCTAATATTTCTGGGGGTCAACAACAACGGGTAGCTA
TTGCTAGAGCAATTGTTAGAAGACCTAAGGTTCTACTTATGGACGAACCGTTGTCCAACTTAGATGCGAAGTTGCGGGTA
CAAACACGGCAATGGATCCGTAAGTTCCAGCAAGACCTGCAAATTACTACTGTCTTTGTGACTCACGATCAGGAAGAGGC
AATGAGTATTAGCGACACGATTGTCTGCATGTCAACTGGTAAGGTACAGCAAATAGGCTCCCCTTCCGAGTTGTACTTAA
AACCGGCCAATGAGTTCGTCGCTACCTTTTTGGGTAGCCCGGAAATGAATATCGTCAACGCTACGGTTAAAGCTGGACAG
CTGTTGTGAAACGAAAATCCCCTAGTTAAAACAAAGTTTGATTTACCTGATGGTGCCATTCGGGTTGGTTTCCGTTATGA
TGAGGTAACGGCTCCCAAAAACGATGGTAGTCCCGTATTTAGCGGTACCCTTATAAGTGTGGAAAACCTAGGGAAACACA
TGGTTGGGGTTGTGGAGAGCAATGGGGTACAGCTCAATGTGCGCTTAGAATTGAGCCACCAGTTTGAAGTAGGTAATGCA
GTTAAGTTTACGATTAAGCCTAATGGCTTACACTTCTTTGATCCCCAAACAACGCAACGGGTGGAGGTAAAACATGTTTA
A

Upstream 100 bases:

>100_bases
CTAGTGCTGGAACCGGTGCTAGTTTGTACCAACTATGAGATCAACGTCAAGCCAAATTAGCCCAAAAGGGTAGTTAATGA
AAGCAGTTTAAACCAGCAAT

Downstream 100 bases:

>100_bases
GTGATTGTTAAAGCACCGCTCTAAACCAACGCCATTGGAGCTGGGAATCTTTGACCAAAAGGTTTCCTTTTGAAAACCAT
TTTTGCTGTTTTGCCCAGCT

Product: sn-glycerol-3-phosphate transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 586; Mature: 586

Protein sequence:

>586_residues
MEKIQAEKSQSAIEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFNGYDVTKKP
PQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTSWREAIFEKNTWAQHDINCLILKANGATSEELAELNRLMQQRIDEPK
RMAYQINDLMVSVFQKQSELEANLKLIPRKKQFAIISLSKETLSQIRDVETKAKAALETADSAEVEQTIKSELKQKLSEI
KANYHDEKANIKAYWWEMLANIKTELKTEKTAIKQTNDYAKLKELKWKIHFEPLNLKKQYRSYFKQLKAKYSLKDGNLTE
SELSQIEELQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLRV
QTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEFVATFLGSPEMNIVNATVKAGQ
LLWNENPLVKTKFDLPDGAIRVGFRYDEVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQLNVRLELSHQFEVGNA
VKFTIKPNGLHFFDPQTTQRVEVKHV

Sequences:

>Translated_586_residues
MEKIQAEKSQSAIEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFNGYDVTKKP
PQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTS*REAIFEKNT*AQHDINCLILKANGATSEELAELNRLMQQRIDEPK
RMAYQINDLMVSVFQKQSELEANLKLIPRKKQFAIISLSKETLSQIRDVETKAKAALETADSAEVEQTIKSELKQKLSEI
KANYHDEKANIKAY*WEMLANIKTELKTEKTAIKQTNDYAKLKELK*KIHFEPLNLKKQYRSYFKQLKAKYSLKDGNLTE
SELSQIEELQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLRV
QTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEFVATFLGSPEMNIVNATVKAGQ
LL*NENPLVKTKFDLPDGAIRVGFRYDEVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQLNVRLELSHQFEVGNA
VKFTIKPNGLHFFDPQTTQRVEVKHV
>Mature_586_residues
MEKIQAEKSQSAIEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAGLIAPTSGQVLFNGYDVTKKP
PQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTS*REAIFEKNT*AQHDINCLILKANGATSEELAELNRLMQQRIDEPK
RMAYQINDLMVSVFQKQSELEANLKLIPRKKQFAIISLSKETLSQIRDVETKAKAALETADSAEVEQTIKSELKQKLSEI
KANYHDEKANIKAY*WEMLANIKTELKTEKTAIKQTNDYAKLKELK*KIHFEPLNLKKQYRSYFKQLKAKYSLKDGNLTE
SELSQIEELQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANISGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLRV
QTRQWIRKFQQDLQITTVFVTHDQEEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEFVATFLGSPEMNIVNATVKAGQ
LL*NENPLVKTKFDLPDGAIRVGFRYDEVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQLNVRLELSHQFEVGNA
VKFTIKPNGLHFFDPQTTQRVEVKHV

Specific function: Part Of The Binding-Protein-Dependent Transport System For Sn-Glycerol-3-Phosphate. Probably Responsible For Energy Coupling To The Transport System. [C]

COG id: COG3839

COG function: function code G; ABC-type sugar transport systems, ATPase components

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=82, Percent_Identity=39.0243902439024, Blast_Score=67, Evalue=3e-11,
Organism=Escherichia coli, GI87082267, Length=264, Percent_Identity=39.0151515151515, Blast_Score=165, Evalue=7e-42,
Organism=Escherichia coli, GI1790467, Length=142, Percent_Identity=50.7042253521127, Blast_Score=152, Evalue=6e-38,
Organism=Escherichia coli, GI87081709, Length=116, Percent_Identity=55.1724137931034, Blast_Score=137, Evalue=1e-33,
Organism=Escherichia coli, GI1787370, Length=131, Percent_Identity=51.1450381679389, Blast_Score=137, Evalue=2e-33,
Organism=Escherichia coli, GI1787712, Length=123, Percent_Identity=49.5934959349593, Blast_Score=135, Evalue=5e-33,
Organism=Escherichia coli, GI1788761, Length=139, Percent_Identity=43.1654676258993, Blast_Score=135, Evalue=6e-33,
Organism=Escherichia coli, GI87081791, Length=287, Percent_Identity=29.616724738676, Blast_Score=115, Evalue=6e-27,
Organism=Escherichia coli, GI1789032, Length=107, Percent_Identity=44.8598130841121, Blast_Score=103, Evalue=3e-23,
Organism=Escherichia coli, GI1788450, Length=113, Percent_Identity=42.4778761061947, Blast_Score=100, Evalue=4e-22,
Organism=Escherichia coli, GI1787164, Length=82, Percent_Identity=45.1219512195122, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1789672, Length=116, Percent_Identity=36.2068965517241, Blast_Score=83, Evalue=4e-17,
Organism=Escherichia coli, GI1787029, Length=126, Percent_Identity=36.5079365079365, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI87081782, Length=108, Percent_Identity=35.1851851851852, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788506, Length=108, Percent_Identity=31.4814814814815, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1787500, Length=114, Percent_Identity=28.9473684210526, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1789586, Length=128, Percent_Identity=30.46875, Blast_Score=80, Evalue=4e-16,
Organism=Escherichia coli, GI145693107, Length=115, Percent_Identity=32.1739130434783, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788225, Length=125, Percent_Identity=36.8, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1789962, Length=118, Percent_Identity=32.2033898305085, Blast_Score=79, Evalue=7e-16,
Organism=Escherichia coli, GI1790162, Length=100, Percent_Identity=41, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1788644, Length=106, Percent_Identity=37.7358490566038, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787089, Length=134, Percent_Identity=36.5671641791045, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1786563, Length=97, Percent_Identity=39.1752577319588, Blast_Score=76, Evalue=5e-15,
Organism=Escherichia coli, GI1786253, Length=78, Percent_Identity=43.5897435897436, Blast_Score=75, Evalue=9e-15,
Organism=Escherichia coli, GI1786398, Length=130, Percent_Identity=31.5384615384615, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1788053, Length=97, Percent_Identity=37.1134020618557, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=124, Percent_Identity=31.4516129032258, Blast_Score=73, Evalue=4e-14,
Organism=Escherichia coli, GI1786698, Length=98, Percent_Identity=34.6938775510204, Blast_Score=72, Evalue=7e-14,
Organism=Escherichia coli, GI1789891, Length=87, Percent_Identity=37.9310344827586, Blast_Score=72, Evalue=9e-14,
Organism=Escherichia coli, GI1789864, Length=101, Percent_Identity=34.6534653465347, Blast_Score=72, Evalue=1e-13,
Organism=Escherichia coli, GI48994883, Length=115, Percent_Identity=27.8260869565217, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI48994943, Length=102, Percent_Identity=30.3921568627451, Blast_Score=70, Evalue=3e-13,
Organism=Escherichia coli, GI1789963, Length=179, Percent_Identity=27.9329608938547, Blast_Score=70, Evalue=4e-13,
Organism=Escherichia coli, GI48994997, Length=128, Percent_Identity=31.25, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081834, Length=88, Percent_Identity=35.2272727272727, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1790544, Length=111, Percent_Identity=35.1351351351351, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1786703, Length=101, Percent_Identity=37.6237623762376, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1787547, Length=119, Percent_Identity=30.2521008403361, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1786872, Length=122, Percent_Identity=30.327868852459, Blast_Score=65, Evalue=2e-11,
Organism=Drosophila melanogaster, GI221512771, Length=97, Percent_Identity=37.1134020618557, Blast_Score=72, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24666092, Length=96, Percent_Identity=33.3333333333333, Blast_Score=67, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR008995 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 65443; Mature: 65443

Theoretical pI: Translated: 9.65; Mature: 9.65

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKIQAEKSQSAIEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAG
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEEHHHEEEEECCCCCCCCHHHHHHHH
LIAPTSGQVLFNGYDVTKKPPQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTSREAIFE
HHCCCCCCEEEECCCCCCCCHHHHHHCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHC
KNTAQHDINCLILKANGATSEELAELNRLMQQRIDEPKRMAYQINDLMVSVFQKQSELEA
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
NLKLIPRKKQFAIISLSKETLSQIRDVETKAKAALETADSAEVEQTIKSELKQKLSEIKA
CCEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NYHDEKANIKAYWEMLANIKTELKTEKTAIKQTNDYAKLKELKKIHFEPLNLKKQYRSYF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
KQLKAKYSLKDGNLTESELSQIEELQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANI
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLRVQTRQWIRKFQQDLQITTVFVTHDQ
CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHEEHHHHHHHHHHHHCCEEEEEEEECCH
EEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEFVATFLGSPEMNIVNATVKAGQLLNE
HHHHCCCCEEEEEECCCHHHCCCCCCEEEECHHHHHHHHHCCCCCEEEEEHHHHCHHCCC
NPLVKTKFDLPDGAIRVGFRYDEVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQL
CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEECEEEEEHHHCCCHHEEEEECCCEEE
NVRLELSHQFEVGNAVKFTIKPNGLHFFDPQTTQRVEVKHV
EEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCEEEECC
>Mature Secondary Structure
MEKIQAEKSQSAIEFKNIVVDFGESIAIDNINLTVKKKELVTLLGPSGCGKTTSLSVIAG
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECEEEEEEHHHEEEEECCCCCCCCHHHHHHHH
LIAPTSGQVLFNGYDVTKKPPQQRKLGLVFQNYALYPHMSVFENIVFPLYSDTSREAIFE
HHCCCCCCEEEECCCCCCCCHHHHHHCEEEECCCCCCCHHHHHHHHCCCCCCCCHHHHHC
KNTAQHDINCLILKANGATSEELAELNRLMQQRIDEPKRMAYQINDLMVSVFQKQSELEA
CCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCC
NLKLIPRKKQFAIISLSKETLSQIRDVETKAKAALETADSAEVEQTIKSELKQKLSEIKA
CCEEECCCCEEEEEEECHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
NYHDEKANIKAYWEMLANIKTELKTEKTAIKQTNDYAKLKELKKIHFEPLNLKKQYRSYF
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHH
KQLKAKYSLKDGNLTESELSQIEELQKRIVSLKDFINRTAKEVAEKLEITKILHKRPANI
HHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SGGQQQRVAIARAIVRRPKVLLMDEPLSNLDAKLRVQTRQWIRKFQQDLQITTVFVTHDQ
CCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHEEHHHHHHHHHHHHCCEEEEEEEECCH
EEAMSISDTIVCMSTGKVQQIGSPSELYLKPANEFVATFLGSPEMNIVNATVKAGQLLNE
HHHHCCCCEEEEEECCCHHHCCCCCCEEEECHHHHHHHHHCCCCCEEEEEHHHHCHHCCC
NPLVKTKFDLPDGAIRVGFRYDEVTAPKNDGSPVFSGTLISVENLGKHMVGVVESNGVQL
CCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCEECEEEEEHHHCCCHHEEEEECCCEEE
NVRLELSHQFEVGNAVKFTIKPNGLHFFDPQTTQRVEVKHV
EEEEEEEEEECCCCEEEEEECCCCEEEECCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8948633; 11271496 [H]