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The map label for this gene is rpmI

Identifier: 13507855

GI number: 13507855

Start: 151254

End: 151433

Strand: Direct

Name: rpmI

Synonym: MPN116

Alternate gene names: 13507855

Gene position: 151254-151433 (Clockwise)

Preceding gene: 13507854

Following gene: 13507856

Centisome position: 18.53

GC content: 42.22

Gene sequence:

>180_bases
ATGAAAGTAAAAAGTGCTGCAAAGAAGCGTTTTAAGCTCACTAAGTCTGGCCAAATTAAGCGCAAACACGCTTATACTTC
CCACTTAGCACCGCACAAAACGACGAAGCAAAAGCGCCACTTGCGCAAGCAAGGAACTGTCAGTGCGAGTGACTTTAAAC
GCATTGGTAATTTAATTTAA

Upstream 100 bases:

>100_bases
ATCTGCTAGTAGAACCAGCAGTGGAGGTCCAAAAACCACTAACTGCTTCTTCCAAAACAATGTATTCTGCTTTGTTAGTT
CCCCGTAAGAAATAAAAATT

Downstream 100 bases:

>100_bases
GGAGTGAACTATGAGAATTAAAGGTGGAAAACAAACCCGCGTACGTCGCAAGAAGTGGTTAAAGCAAGCTAGTGGTAGCT
TTGGTACCCGACATGCCTCT

Product: 50S ribosomal protein L35

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI

Sequences:

>Translated_59_residues
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI
>Mature_59_residues
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI

Specific function: Unknown

COG id: COG0291

COG function: function code J; Ribosomal protein L35

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L35P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL35_MYCPN (P75447)

Other databases:

- EMBL:   U00089
- PIR:   S73364
- RefSeq:   NP_109804.1
- ProteinModelPortal:   P75447
- SMR:   P75447
- GeneID:   877369
- GenomeReviews:   U00089_GR
- KEGG:   mpn:MPN116
- HOGENOM:   HBG734125
- OMA:   NHLAASK
- ProtClustDB:   PRK00172
- BioCyc:   MPNE272634:MPN116-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00514
- InterPro:   IPR021137
- InterPro:   IPR018265
- InterPro:   IPR001706
- PRINTS:   PR00064
- TIGRFAMs:   TIGR00001

Pfam domain/function: PF01632 Ribosomal_L35p

EC number: NA

Molecular weight: Translated: 6771; Mature: 6771

Theoretical pI: Translated: 12.43; Mature: 12.43

Prosite motif: PS00936 RIBOSOMAL_L35

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure
MKVKSAAKKRFKLTKSGQIKRKHAYTSHLAPHKTTKQKRHLRKQGTVSASDFKRIGNLI
CCCCHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8948633; 11271496