Definition Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence.
Accession NC_002682
Length 208,315

Click here to switch to the map view.

The map label for this gene is 13488560

Identifier: 13488560

GI number: 13488560

Start: 189603

End: 190220

Strand: Direct

Name: 13488560

Synonym: mlr9732

Alternate gene names: NA

Gene position: 189603-190220 (Clockwise)

Preceding gene: 13488559

Following gene: 13488561

Centisome position: 91.02

GC content: 63.75

Gene sequence:

>618_bases
GTGAGTGAAGATAAGGCAGCTTCACAATCCCCATCAATTGGCGACAACCAGCCGTCGACCGATCCAGCACTTCTCCTGTC
CCTTGCCTGGATTGACGCTCACGTTGCGATGCTGGCCTCGTGCGTCCGGCAGCAGCAGGCGGAGGAGGGGCCATTGGAGC
GCTGCGCGCTCTTGCCTCCCGGAGAAGTCATGGGGGGCGGGGAGGGGATTGGCGCCTACCGCGACTATCTCGATGCCCGC
ACGGTGGAGCGGGATGATGCTGAAAAGGCCGACGCCCTGTTGGCCGAGATTGCGACGACACCCGCTCGATCCATGGCGGG
CGTGATCGCCAAGCTCGCGGTCATCCTTCGGGAGGCGAGTGACAACACAGACCTTTGCGAGTTTCCGCTGCCGCACATCC
GCTCGGCCTTGGCCGATCTGCGGCGTCTCACGCATGAAACGGTAAGCGACCCGCCTGCGAGCTGGCCCGCAGGCGATCAG
TCGATCGGCATTCTGTTCGAGCAGCCTGCATCGTCGTTCGCCGCCTGGCGTGCCTTTCGCGCCTGGAGCCAAGGCGATGA
CGACGCCTATCGCGCCTGGACGGACACATTCAAGACACTGCAAGGCGTAAGCCAGTAG

Upstream 100 bases:

>100_bases
CGGCCCCACTACGCGACGACGTTGATAGCTCAGAATCTTCATTGATTCTGACGATAGCCACCAATTGTCCTTTCGTCACG
GGTGAGAACGGGAGGCGTCG

Downstream 100 bases:

>100_bases
GGATCGCAAAAATTCTTACTTGATCGCTCAGCGCCGAGATCTCTCCTCGTTCATTCGTCAATGACGGAATCCAAGGATTT
CGCTCAACGCTGCGTCCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDAR
TVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQ
SIGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ

Sequences:

>Translated_205_residues
MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDAR
TVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQ
SIGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ
>Mature_204_residues
SEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDART
VERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQS
IGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22068; Mature: 21937

Theoretical pI: Translated: 4.26; Mature: 4.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
GEVMGGGEGIGAYRDYLDARTVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREAS
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQSIGILFEQPASSFAAWRAFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AWSQGDDDAYRAWTDTFKTLQGVSQ
HHCCCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPP
CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC
GEVMGGGEGIGAYRDYLDARTVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREAS
HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC
DNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQSIGILFEQPASSFAAWRAFR
CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH
AWSQGDDDAYRAWTDTFKTLQGVSQ
HHCCCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA