| Definition | Mesorhizobium loti MAFF303099 plasmid pMLb, complete sequence. |
|---|---|
| Accession | NC_002682 |
| Length | 208,315 |
Click here to switch to the map view.
The map label for this gene is 13488560
Identifier: 13488560
GI number: 13488560
Start: 189603
End: 190220
Strand: Direct
Name: 13488560
Synonym: mlr9732
Alternate gene names: NA
Gene position: 189603-190220 (Clockwise)
Preceding gene: 13488559
Following gene: 13488561
Centisome position: 91.02
GC content: 63.75
Gene sequence:
>618_bases GTGAGTGAAGATAAGGCAGCTTCACAATCCCCATCAATTGGCGACAACCAGCCGTCGACCGATCCAGCACTTCTCCTGTC CCTTGCCTGGATTGACGCTCACGTTGCGATGCTGGCCTCGTGCGTCCGGCAGCAGCAGGCGGAGGAGGGGCCATTGGAGC GCTGCGCGCTCTTGCCTCCCGGAGAAGTCATGGGGGGCGGGGAGGGGATTGGCGCCTACCGCGACTATCTCGATGCCCGC ACGGTGGAGCGGGATGATGCTGAAAAGGCCGACGCCCTGTTGGCCGAGATTGCGACGACACCCGCTCGATCCATGGCGGG CGTGATCGCCAAGCTCGCGGTCATCCTTCGGGAGGCGAGTGACAACACAGACCTTTGCGAGTTTCCGCTGCCGCACATCC GCTCGGCCTTGGCCGATCTGCGGCGTCTCACGCATGAAACGGTAAGCGACCCGCCTGCGAGCTGGCCCGCAGGCGATCAG TCGATCGGCATTCTGTTCGAGCAGCCTGCATCGTCGTTCGCCGCCTGGCGTGCCTTTCGCGCCTGGAGCCAAGGCGATGA CGACGCCTATCGCGCCTGGACGGACACATTCAAGACACTGCAAGGCGTAAGCCAGTAG
Upstream 100 bases:
>100_bases CGGCCCCACTACGCGACGACGTTGATAGCTCAGAATCTTCATTGATTCTGACGATAGCCACCAATTGTCCTTTCGTCACG GGTGAGAACGGGAGGCGTCG
Downstream 100 bases:
>100_bases GGATCGCAAAAATTCTTACTTGATCGCTCAGCGCCGAGATCTCTCCTCGTTCATTCGTCAATGACGGAATCCAAGGATTT CGCTCAACGCTGCGTCCCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 205; Mature: 204
Protein sequence:
>205_residues MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDAR TVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQ SIGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ
Sequences:
>Translated_205_residues MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDAR TVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQ SIGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ >Mature_204_residues SEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPPGEVMGGGEGIGAYRDYLDART VERDDAEKADALLAEIATTPARSMAGVIAKLAVILREASDNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQS IGILFEQPASSFAAWRAFRAWSQGDDDAYRAWTDTFKTLQGVSQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22068; Mature: 21937
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPP CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC GEVMGGGEGIGAYRDYLDARTVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREAS HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC DNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQSIGILFEQPASSFAAWRAFR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH AWSQGDDDAYRAWTDTFKTLQGVSQ HHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SEDKAASQSPSIGDNQPSTDPALLLSLAWIDAHVAMLASCVRQQQAEEGPLERCALLPP CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCC GEVMGGGEGIGAYRDYLDARTVERDDAEKADALLAEIATTPARSMAGVIAKLAVILREAS HHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC DNTDLCEFPLPHIRSALADLRRLTHETVSDPPASWPAGDQSIGILFEQPASSFAAWRAFR CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHH AWSQGDDDAYRAWTDTFKTLQGVSQ HHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA