| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is 13488360
Identifier: 13488360
GI number: 13488360
Start: 245381
End: 245635
Strand: Direct
Name: 13488360
Synonym: msr9268
Alternate gene names: NA
Gene position: 245381-245635 (Clockwise)
Preceding gene: 13488274
Following gene: 13488275
Centisome position: 69.73
GC content: 60.78
Gene sequence:
>255_bases GTGAGCCCGATGCTGAACGCATTCACCACGAACAGCGCGGATGTCGCGCTGTTCGACAGGATCGATTTTGCCGCCTTGCG TATGCTGCGCGAGCAGCGGATCGAGGTCGCATTCATTGGCGTCAACGCCGTGCATCCGACCGATGACCTACGAGGAAGCC GAGGGCGGGGCCCGAGGAAGCCGCGGGCGGGGCAGTTCTACACCGTCAAAATCCGTCATGATCCCGCAAATGGTGCAGCT CGGCAAAAACTTTGA
Upstream 100 bases:
>100_bases CCATGCCGTTCATCTATGGGCAAAGGAAGGACATCTCTTGGCAGCCCAATCCGTTGCCGCAGATGTGGCTGGGCCCGAAG TTGCCGCCCGAGCCTGTGGC
Downstream 100 bases:
>100_bases GCACACATATCCCGTTGTTTCGACAAGAACTTAAGTCGCGTTGCCGGATAAATCCATCATAGTCCGGCTTAAACCCTCAT AAAACCGTCATACAGCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 84; Mature: 83
Protein sequence:
>84_residues MSPMLNAFTTNSADVALFDRIDFAALRMLREQRIEVAFIGVNAVHPTDDLRGSRGRGPRKPRAGQFYTVKIRHDPANGAA RQKL
Sequences:
>Translated_84_residues MSPMLNAFTTNSADVALFDRIDFAALRMLREQRIEVAFIGVNAVHPTDDLRGSRGRGPRKPRAGQFYTVKIRHDPANGAA RQKL >Mature_83_residues SPMLNAFTTNSADVALFDRIDFAALRMLREQRIEVAFIGVNAVHPTDDLRGSRGRGPRKPRAGQFYTVKIRHDPANGAAR QKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9380; Mature: 9249
Theoretical pI: Translated: 11.66; Mature: 11.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPMLNAFTTNSADVALFDRIDFAALRMLREQRIEVAFIGVNAVHPTDDLRGSRGRGPRK CCCCCCCEECCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC PRAGQFYTVKIRHDPANGAARQKL CCCCCEEEEEEEECCCCCCCCCCC >Mature Secondary Structure SPMLNAFTTNSADVALFDRIDFAALRMLREQRIEVAFIGVNAVHPTDDLRGSRGRGPRK CCCCCCEECCCCCEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCC PRAGQFYTVKIRHDPANGAARQKL CCCCCEEEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA