Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

Click here to switch to the map view.

The map label for this gene is 13488326

Identifier: 13488326

GI number: 13488326

Start: 65712

End: 66008

Strand: Reverse

Name: 13488326

Synonym: msl9074

Alternate gene names: NA

Gene position: 66008-65712 (Counterclockwise)

Preceding gene: 13488337

Following gene: 13488325

Centisome position: 18.76

GC content: 60.27

Gene sequence:

>297_bases
ATGATCCTGGAAAGCGGTCCCGAGGATCGGCAGCGTATCGCGCTCGCCTATCAAGAAGCGCAAACCCTGGTTGCCAGCAT
CCCGAAGGATAGTGGCGATGCCCGCCCGCGCATCGCGGCCTGCATCAAGCGGTCTGATACCTATATGGCGGTGGACGATA
TTGCCTGCGTCGGTTGGACGCTGACGGCCATTGAGGAGCGGGTGGACGAACGAAACCTCTCCACTTGGCGGCAGCTCCGC
AAGATCATCAACAAGATCCTCAGGGAGCTGCCCTTGTCCAAGCCGGCAGTGCATTGA

Upstream 100 bases:

>100_bases
CCCTGCCCTCCTCCACATTTTGGGACTTTTCATTGGAATCCGATCCGAAATGAGGGATGAATCCGAGGAAATATCGAACA
CCCTCGCGTGGACTTGCCGC

Downstream 100 bases:

>100_bases
TGGGCAACACGATCCCCTCATCTGCCCGATCGGAGTCGCCCTACGTTCAAGTGATCTTGGCTTCGTCGCTGCGACCGATG
TCGGTCGCTAGCGCTGCCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MILESGPEDRQRIALAYQEAQTLVASIPKDSGDARPRIAACIKRSDTYMAVDDIACVGWTLTAIEERVDERNLSTWRQLR
KIINKILRELPLSKPAVH

Sequences:

>Translated_98_residues
MILESGPEDRQRIALAYQEAQTLVASIPKDSGDARPRIAACIKRSDTYMAVDDIACVGWTLTAIEERVDERNLSTWRQLR
KIINKILRELPLSKPAVH
>Mature_98_residues
MILESGPEDRQRIALAYQEAQTLVASIPKDSGDARPRIAACIKRSDTYMAVDDIACVGWTLTAIEERVDERNLSTWRQLR
KIINKILRELPLSKPAVH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11088; Mature: 11088

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILESGPEDRQRIALAYQEAQTLVASIPKDSGDARPRIAACIKRSDTYMAVDDIACVGWT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHH
LTAIEERVDERNLSTWRQLRKIINKILRELPLSKPAVH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MILESGPEDRQRIALAYQEAQTLVASIPKDSGDARPRIAACIKRSDTYMAVDDIACVGWT
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEHHHHHHHHHHH
LTAIEERVDERNLSTWRQLRKIINKILRELPLSKPAVH
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA