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The map label for this gene is xerC [C]

Identifier: 13488301

GI number: 13488301

Start: 285534

End: 286544

Strand: Direct

Name: xerC [C]

Synonym: mlr9324

Alternate gene names: 13488301

Gene position: 285534-286544 (Clockwise)

Preceding gene: 13488300

Following gene: 13488364

Centisome position: 81.14

GC content: 55.49

Gene sequence:

>1011_bases
ATGCCGAATAGAAAAACGCACCCTTCCTTCGCGGTCTTGCTACAGCGGTACTTCACCGAACATCTTACCAATCAGCGCGC
GGTCAGTCCGCGGACTATTGCGGCTTATCGGGATACGTTCCGCCTGTTGCTGCGCTTCGCGGAGCGGCATATTGGCAAGG
CCCCGGCAAATGTCGAGTTGCTGGATCTCGATTCGGAATTGATCCTCGCCTTTCTCGACCATCTGGAGCGAGAGCGCGAC
AACGGCCCGCGCAGCCGCAACGTTCGTCTTTCCGCAATCCGGTCCTTTCTTCATTACGCTTCCCATCATGACGTTACCGC
TTTGCCGACCATCCAGCGAGCTTTGGCAATCCCTCAGAAGCGCTACGACAAACCCCTGCTCGAGTTTCTCTCTCGGGAGG
AAATGCAGGCCATTCTCGATGCGCCGAACCAGCTGGAATGGACCGGTCGAAGGGATCAAGCGTTCTTCACAACGATGTAC
AATACGGGAGGCCGAGTATCGGAATTAATTGGCCTTCGTGTCTCCGATGTCGTTTTGGACGGTTCTGCGTGCATCCATAT
CAATGGCAAAGGGCGCAAACAGCGCACAGTTCCCCTGTGGCGGAGTTCGGCCAATCTGCTTCGGGCATGGAGGCGTGAAG
CCGGAGATGTTGCGGGGTCCGCAGCGTTTTTCCCTAATCGGGATGGCGTTGCAATGACCCGATCAAACGTAACACAGCGT
CTCGCTCTTTACGTCAAGAAAGCGGCGGAGAAAAAACCGCAACTTCTTGCGAAGACAATATCTCCTCACACCTTCCGACA
TTCAACAGCAATGCACCTCCTGCAGTCCGGAGTTGATATCTCTGTAATCGCGCTTTGGCTCGGCCACGAAAGCCCGACGA
CGACGCACAACTATCTTCAGGCTGATTTATCAATGAAGGAGCGCGCTCTTGCGCGTCTCCAACCTCTGCAAACTGGGAGA
ACCCGCTATAGGCCACCCGACGCCTTGATGCAGTTCCTGCAGGCACTCTAA

Upstream 100 bases:

>100_bases
GTGACATACACCTATTGGTACCTTACCGGCATTCCTGAACTCATGACGGTTGTTGGCCAGCGCTTCGAGGCGTTTGCTGA
GAGTGCGCGGGGGGCCGAAA

Downstream 100 bases:

>100_bases
CTTTATTATGTGCAGTTCAGCGTTAGCCAATTGCGCTGGCACTTTTACGCCGCACGGTGAGCTGCACATAATATCGATCT
GCGCATAACTGAACTCCTGG

Product: integrase/recombinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 335

Protein sequence:

>336_residues
MPNRKTHPSFAVLLQRYFTEHLTNQRAVSPRTIAAYRDTFRLLLRFAERHIGKAPANVELLDLDSELILAFLDHLERERD
NGPRSRNVRLSAIRSFLHYASHHDVTALPTIQRALAIPQKRYDKPLLEFLSREEMQAILDAPNQLEWTGRRDQAFFTTMY
NTGGRVSELIGLRVSDVVLDGSACIHINGKGRKQRTVPLWRSSANLLRAWRREAGDVAGSAAFFPNRDGVAMTRSNVTQR
LALYVKKAAEKKPQLLAKTISPHTFRHSTAMHLLQSGVDISVIALWLGHESPTTTHNYLQADLSMKERALARLQPLQTGR
TRYRPPDALMQFLQAL

Sequences:

>Translated_336_residues
MPNRKTHPSFAVLLQRYFTEHLTNQRAVSPRTIAAYRDTFRLLLRFAERHIGKAPANVELLDLDSELILAFLDHLERERD
NGPRSRNVRLSAIRSFLHYASHHDVTALPTIQRALAIPQKRYDKPLLEFLSREEMQAILDAPNQLEWTGRRDQAFFTTMY
NTGGRVSELIGLRVSDVVLDGSACIHINGKGRKQRTVPLWRSSANLLRAWRREAGDVAGSAAFFPNRDGVAMTRSNVTQR
LALYVKKAAEKKPQLLAKTISPHTFRHSTAMHLLQSGVDISVIALWLGHESPTTTHNYLQADLSMKERALARLQPLQTGR
TRYRPPDALMQFLQAL
>Mature_335_residues
PNRKTHPSFAVLLQRYFTEHLTNQRAVSPRTIAAYRDTFRLLLRFAERHIGKAPANVELLDLDSELILAFLDHLERERDN
GPRSRNVRLSAIRSFLHYASHHDVTALPTIQRALAIPQKRYDKPLLEFLSREEMQAILDAPNQLEWTGRRDQAFFTTMYN
TGGRVSELIGLRVSDVVLDGSACIHINGKGRKQRTVPLWRSSANLLRAWRREAGDVAGSAAFFPNRDGVAMTRSNVTQRL
ALYVKKAAEKKPQLLAKTISPHTFRHSTAMHLLQSGVDISVIALWLGHESPTTTHNYLQADLSMKERALARLQPLQTGRT
RYRPPDALMQFLQAL

Specific function: Site-Specific Tyrosine Recombinase, Which Acts By Catalyzing The Cutting And Rejoining Of The Recombining DNA Molecules. Binds Cooperatively To Specific DNA Consensus Sequences That Are Separated From Xerd Binding Sites By A Short Central Region, Forming

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

Organism=Escherichia coli, GI1790244, Length=293, Percent_Identity=27.9863481228669, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789261, Length=291, Percent_Identity=28.8659793814433, Blast_Score=89, Evalue=5e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR010998
- InterPro:   IPR023109
- InterPro:   IPR004107 [H]

Pfam domain/function: PF02899 Phage_integr_N; PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 38228; Mature: 38097

Theoretical pI: Translated: 10.95; Mature: 10.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNRKTHPSFAVLLQRYFTEHLTNQRAVSPRTIAAYRDTFRLLLRFAERHIGKAPANVEL
CCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LDLDSELILAFLDHLERERDNGPRSRNVRLSAIRSFLHYASHHDVTALPTIQRALAIPQK
EECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
RYDKPLLEFLSREEMQAILDAPNQLEWTGRRDQAFFTTMYNTGGRVSELIGLRVSDVVLD
HCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCHHHHHHCCHHHHEEEC
GSACIHINGKGRKQRTVPLWRSSANLLRAWRREAGDVAGSAAFFPNRDGVAMTRSNVTQR
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHH
LALYVKKAAEKKPQLLAKTISPHTFRHSTAMHLLQSGVDISVIALWLGHESPTTTHNYLQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHH
ADLSMKERALARLQPLQTGRTRYRPPDALMQFLQAL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC
>Mature Secondary Structure 
PNRKTHPSFAVLLQRYFTEHLTNQRAVSPRTIAAYRDTFRLLLRFAERHIGKAPANVEL
CCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
LDLDSELILAFLDHLERERDNGPRSRNVRLSAIRSFLHYASHHDVTALPTIQRALAIPQK
EECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH
RYDKPLLEFLSREEMQAILDAPNQLEWTGRRDQAFFTTMYNTGGRVSELIGLRVSDVVLD
HCCCHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCCHHHHHHCCHHHHEEEC
GSACIHINGKGRKQRTVPLWRSSANLLRAWRREAGDVAGSAAFFPNRDGVAMTRSNVTQR
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHH
LALYVKKAAEKKPQLLAKTISPHTFRHSTAMHLLQSGVDISVIALWLGHESPTTTHNYLQ
HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCHHHHHH
ADLSMKERALARLQPLQTGRTRYRPPDALMQFLQAL
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]