| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
Click here to switch to the map view.
The map label for this gene is parA [H]
Identifier: 13488291
GI number: 13488291
Start: 265938
End: 266630
Strand: Direct
Name: parA [H]
Synonym: mlr9294
Alternate gene names: 13488291
Gene position: 265938-266630 (Clockwise)
Preceding gene: 13488290
Following gene: 13488292
Centisome position: 75.57
GC content: 62.63
Gene sequence:
>693_bases ATGCCGGAACAACGCGCGGTGCAAATCACAGTGGCCTCTCCCAAAGGCGGGGTAGGCAAGACCGTGACCACCATCCTGCT CGCTGGCGAGTTCGCCGCCGCTGGTCATCGGGTGACGGTGCTCGACACCGATCCGCAACTGTCCGCGGTGGAATGGAGCA AAAACAGCCGCCGCGCGGGATACGCTCTTTCAAACATCGACGTCATCCCGATCAGCTCGACCGACGAACTTATCGATCGC CTCGCGCAATCCGACGCCGAGGACCTGCTGCTGGTCGATGTCCAGGGCACGGCCGTGGCCGCCCTCGGACCGGCCGTCGC CAACGCCGACTTCGTTCTGATCCCGACGAAAGCGCACGTCTTCGATGTCAAGCAATGCCTCGGTCTGATCCGGCACATCC GCTCGCTTGGCGGACGCCACCGCGAAATTCCCTACGCGGTGATGCTCAACATGGTTTCGGGGATCGAGCACAACACGATG GCCTTCCGCACAGCGATCCAGTTGCTGCGGCAGGCTGATGCCAGCGTGCTTGAGACCTTTTTGTCGCAGCGGCCGACCTT CGCCTCAATCGCAACCGCCGGGACGCTTTACGAAGTCCGGCCTGTGAACAAGGCCGTGCAGGATGCTCGCGACCAGACGA ATGCCCTGACCGCCGAGATCATCAGCAAACTGAACGGAGCCACCCCCCAATGA
Upstream 100 bases:
>100_bases GTTGCATCGGCGCATAGGCATAATGCAAGAAAGTCACTTTGGCGCCAAATCGCCTATGTGCCTTGACGCCAAAGTCGAAC GCGAACATTGGGAAAAAGCA
Downstream 100 bases:
>100_bases ACGAGAAAAGCGATCGGACCGCAAACCAGCTGCCGCTGCCCGCCTTGAAACCGCGTGCCCGTTCGGATGATCCGTTCTCA CGCAACATGGCTGCCATCGT
Product: plasmid partitioning protein ParA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 230; Mature: 229
Protein sequence:
>230_residues MPEQRAVQITVASPKGGVGKTVTTILLAGEFAAAGHRVTVLDTDPQLSAVEWSKNSRRAGYALSNIDVIPISSTDELIDR LAQSDAEDLLLVDVQGTAVAALGPAVANADFVLIPTKAHVFDVKQCLGLIRHIRSLGGRHREIPYAVMLNMVSGIEHNTM AFRTAIQLLRQADASVLETFLSQRPTFASIATAGTLYEVRPVNKAVQDARDQTNALTAEIISKLNGATPQ
Sequences:
>Translated_230_residues MPEQRAVQITVASPKGGVGKTVTTILLAGEFAAAGHRVTVLDTDPQLSAVEWSKNSRRAGYALSNIDVIPISSTDELIDR LAQSDAEDLLLVDVQGTAVAALGPAVANADFVLIPTKAHVFDVKQCLGLIRHIRSLGGRHREIPYAVMLNMVSGIEHNTM AFRTAIQLLRQADASVLETFLSQRPTFASIATAGTLYEVRPVNKAVQDARDQTNALTAEIISKLNGATPQ >Mature_229_residues PEQRAVQITVASPKGGVGKTVTTILLAGEFAAAGHRVTVLDTDPQLSAVEWSKNSRRAGYALSNIDVIPISSTDELIDRL AQSDAEDLLLVDVQGTAVAALGPAVANADFVLIPTKAHVFDVKQCLGLIRHIRSLGGRHREIPYAVMLNMVSGIEHNTMA FRTAIQLLRQADASVLETFLSQRPTFASIATAGTLYEVRPVNKAVQDARDQTNALTAEIISKLNGATPQ
Specific function: Unknown
COG id: COG1192
COG function: function code D; ATPases involved in chromosome partitioning
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002586 [H]
Pfam domain/function: PF01656 CbiA [H]
EC number: NA
Molecular weight: Translated: 24606; Mature: 24475
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEQRAVQITVASPKGGVGKTVTTILLAGEFAAAGHRVTVLDTDPQLSAVEWSKNSRRAG CCCCEEEEEEEECCCCCCCHHHHHHHHHCCHHCCCCEEEEEECCCCCEEEECCCCCCCCC YALSNIDVIPISSTDELIDRLAQSDAEDLLLVDVQGTAVAALGPAVANADFVLIPTKAHV EEECCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEHHCHHHCCCCEEEECCCHHH FDVKQCLGLIRHIRSLGGRHREIPYAVMLNMVSGIEHNTMAFRTAIQLLRQADASVLETF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH LSQRPTFASIATAGTLYEVRPVNKAVQDARDQTNALTAEIISKLNGATPQ HHCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure PEQRAVQITVASPKGGVGKTVTTILLAGEFAAAGHRVTVLDTDPQLSAVEWSKNSRRAG CCCEEEEEEEECCCCCCCHHHHHHHHHCCHHCCCCEEEEEECCCCCEEEECCCCCCCCC YALSNIDVIPISSTDELIDRLAQSDAEDLLLVDVQGTAVAALGPAVANADFVLIPTKAHV EEECCEEEEECCCHHHHHHHHHHCCCCCEEEEEECCCEEEHHCHHHCCCCEEEECCCHHH FDVKQCLGLIRHIRSLGGRHREIPYAVMLNMVSGIEHNTMAFRTAIQLLRQADASVLETF HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCHHHHHHH LSQRPTFASIATAGTLYEVRPVNKAVQDARDQTNALTAEIISKLNGATPQ HHCCCCHHHHHHCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 3586028 [H]