| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is phnL [H]
Identifier: 13488287
GI number: 13488287
Start: 257577
End: 258311
Strand: Direct
Name: phnL [H]
Synonym: mlr9286
Alternate gene names: 13488287
Gene position: 257577-258311 (Clockwise)
Preceding gene: 13488361
Following gene: 13488288
Centisome position: 73.19
GC content: 63.81
Gene sequence:
>735_bases ATGACCATTCGTTTGCACGCCAAGGGTCTGACCAAGACCTTCACGCTCCACACCCAGGGCGGCATCGTCCTGCCCGTCTT CGACAACATCGATCTTACGGTGAAGTCCGGCGAATGCGTCTGCCTGCACGGGCCGTCCGGCGCCGGCAAGTCGACGCTTC TGCGCTCGCTTTATGCCAACTACAAGCCGGATGAGGGCAAGATCCTCGTCGAGCATATGGGCGAGACCGTGGACCTGCTC GCTGCTGAGCCTTGGGAGGTAGTGGAGATCCGCCGCAGCACCATCGGCTATGTCAGCCAGTTCCTGCGGGTCATCCCGCG CGTCGGCGCCCTTGATGTCGTAGCCGAACCGGTGATCGCCAAAGGTATGCCGGCAAAGGACGCCAGGGCGCTCGCCACGA CCCTGCTGACCCGCCTGCGAATTCCCGAACGTTTATGGTCGCTGGCGCCGGCCACCTTTTCCGGTGGTGAGCAGCAGCGG GTCAACATCGCCCGGGGCTTCATCGTCGACTATCCGGTCCTGCTGCTCGACGAACCGACAGCCTCGCTCGACGCCTCCAA CCGTGCGACCGTTGTCGACCTGATCAACGAGGCGAAATCCCGCGGTGCCGCGATCGTTGGCATCTTCCATGACGAGGAAG TGCGAGAAACCGTTGCCGACAGGCTGTTCGAGGTCGGCAGTCAAGGGACCACCACGGTTGAGCCTGCTCTGGCCGGCGCG GGAGCCTGCGCCTGA
Upstream 100 bases:
>100_bases GAGCAGGGCCTGACCGACCAAGTGCTCGACGACCCCCATCATCCCTATACGCAACTGCTTGTCTCCTCCGTCCTGCAGGT TTGAGACAAAAGGACAACTG
Downstream 100 bases:
>100_bases TGCCGGAACCATGCAGTCCTCGCTACGGAATTTACTACACCCCAGCTCGGGAACATCCGCTGACGGTGGCGGCGATTTCA TGGCTTGGCCGCGATGCGTT
Product: phosphonates transport ATP-binding protein PhnL
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTIRLHAKGLTKTFTLHTQGGIVLPVFDNIDLTVKSGECVCLHGPSGAGKSTLLRSLYANYKPDEGKILVEHMGETVDLL AAEPWEVVEIRRSTIGYVSQFLRVIPRVGALDVVAEPVIAKGMPAKDARALATTLLTRLRIPERLWSLAPATFSGGEQQR VNIARGFIVDYPVLLLDEPTASLDASNRATVVDLINEAKSRGAAIVGIFHDEEVRETVADRLFEVGSQGTTTVEPALAGA GACA
Sequences:
>Translated_244_residues MTIRLHAKGLTKTFTLHTQGGIVLPVFDNIDLTVKSGECVCLHGPSGAGKSTLLRSLYANYKPDEGKILVEHMGETVDLL AAEPWEVVEIRRSTIGYVSQFLRVIPRVGALDVVAEPVIAKGMPAKDARALATTLLTRLRIPERLWSLAPATFSGGEQQR VNIARGFIVDYPVLLLDEPTASLDASNRATVVDLINEAKSRGAAIVGIFHDEEVRETVADRLFEVGSQGTTTVEPALAGA GACA >Mature_243_residues TIRLHAKGLTKTFTLHTQGGIVLPVFDNIDLTVKSGECVCLHGPSGAGKSTLLRSLYANYKPDEGKILVEHMGETVDLLA AEPWEVVEIRRSTIGYVSQFLRVIPRVGALDVVAEPVIAKGMPAKDARALATTLLTRLRIPERLWSLAPATFSGGEQQRV NIARGFIVDYPVLLLDEPTASLDASNRATVVDLINEAKSRGAAIVGIFHDEEVRETVADRLFEVGSQGTTTVEPALAGAG ACA
Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates. Probably responsible for energy coupling to the transport system [H]
COG id: COG4778
COG function: function code P; ABC-type phosphonate transport system, ATPase component
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transporter domain [H]
Homologues:
Organism=Homo sapiens, GI9961252, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI4505771, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI9961250, Length=193, Percent_Identity=27.979274611399, Blast_Score=70, Evalue=2e-12, Organism=Homo sapiens, GI27881501, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI30795238, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-12, Organism=Homo sapiens, GI21536378, Length=190, Percent_Identity=29.4736842105263, Blast_Score=69, Evalue=3e-12, Organism=Escherichia coli, GI1790534, Length=223, Percent_Identity=65.9192825112108, Blast_Score=305, Evalue=3e-84, Organism=Escherichia coli, GI1789672, Length=198, Percent_Identity=34.3434343434343, Blast_Score=109, Evalue=2e-25, Organism=Escherichia coli, GI1788225, Length=220, Percent_Identity=35.9090909090909, Blast_Score=108, Evalue=4e-25, Organism=Escherichia coli, GI1787029, Length=198, Percent_Identity=34.8484848484849, Blast_Score=102, Evalue=2e-23, Organism=Escherichia coli, GI87081834, Length=241, Percent_Identity=32.3651452282158, Blast_Score=100, Evalue=1e-22, Organism=Escherichia coli, GI1786703, Length=194, Percent_Identity=34.5360824742268, Blast_Score=97, Evalue=7e-22, Organism=Escherichia coli, GI1787105, Length=200, Percent_Identity=33, Blast_Score=96, Evalue=2e-21, Organism=Escherichia coli, GI1787089, Length=198, Percent_Identity=34.8484848484849, Blast_Score=92, Evalue=3e-20, Organism=Escherichia coli, GI1786398, Length=213, Percent_Identity=30.9859154929577, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789962, Length=201, Percent_Identity=31.3432835820896, Blast_Score=89, Evalue=2e-19, Organism=Escherichia coli, GI48994997, Length=209, Percent_Identity=33.9712918660287, Blast_Score=87, Evalue=1e-18, Organism=Escherichia coli, GI87081709, Length=238, Percent_Identity=30.672268907563, Blast_Score=86, Evalue=2e-18, Organism=Escherichia coli, GI145693107, Length=200, Percent_Identity=32.5, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1789032, Length=241, Percent_Identity=29.8755186721992, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI1787500, Length=205, Percent_Identity=28.780487804878, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI48995001, Length=225, Percent_Identity=30.6666666666667, Blast_Score=84, Evalue=8e-18, Organism=Escherichia coli, GI1786698, Length=189, Percent_Identity=30.1587301587302, Blast_Score=84, Evalue=1e-17, Organism=Escherichia coli, GI1787758, Length=199, Percent_Identity=31.1557788944724, Blast_Score=83, Evalue=1e-17, Organism=Escherichia coli, GI1788644, Length=194, Percent_Identity=30.9278350515464, Blast_Score=82, Evalue=3e-17, Organism=Escherichia coli, GI1787712, Length=196, Percent_Identity=30.6122448979592, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI1789873, Length=182, Percent_Identity=32.967032967033, Blast_Score=79, Evalue=3e-16, Organism=Escherichia coli, GI1788761, Length=212, Percent_Identity=32.0754716981132, Blast_Score=77, Evalue=9e-16, Organism=Escherichia coli, GI1787370, Length=217, Percent_Identity=29.4930875576037, Blast_Score=76, Evalue=2e-15, Organism=Escherichia coli, GI1789891, Length=200, Percent_Identity=30.5, Blast_Score=76, Evalue=3e-15, Organism=Escherichia coli, GI87081791, Length=223, Percent_Identity=28.2511210762332, Blast_Score=75, Evalue=5e-15, Organism=Escherichia coli, GI1790544, Length=214, Percent_Identity=31.3084112149533, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1787759, Length=211, Percent_Identity=30.3317535545024, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1786872, Length=181, Percent_Identity=30.3867403314917, Blast_Score=74, Evalue=1e-14, Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=28.8793103448276, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1788472, Length=218, Percent_Identity=28.8990825688073, Blast_Score=71, Evalue=8e-14, Organism=Escherichia coli, GI1789593, Length=195, Percent_Identity=30.7692307692308, Blast_Score=69, Evalue=2e-13, Organism=Escherichia coli, GI48994883, Length=230, Percent_Identity=29.5652173913043, Blast_Score=69, Evalue=3e-13, Organism=Escherichia coli, GI1788450, Length=187, Percent_Identity=32.0855614973262, Blast_Score=69, Evalue=4e-13, Organism=Escherichia coli, GI1787164, Length=207, Percent_Identity=33.8164251207729, Blast_Score=68, Evalue=6e-13, Organism=Escherichia coli, GI1788506, Length=217, Percent_Identity=28.5714285714286, Blast_Score=67, Evalue=1e-12, Organism=Escherichia coli, GI1786253, Length=194, Percent_Identity=26.8041237113402, Blast_Score=66, Evalue=2e-12, Organism=Escherichia coli, GI1788897, Length=201, Percent_Identity=31.8407960199005, Blast_Score=65, Evalue=3e-12, Organism=Escherichia coli, GI1786345, Length=221, Percent_Identity=28.5067873303167, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1787792, Length=239, Percent_Identity=30.1255230125523, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1790467, Length=200, Percent_Identity=27.5, Blast_Score=65, Evalue=4e-12, Organism=Escherichia coli, GI1786803, Length=196, Percent_Identity=27.0408163265306, Blast_Score=65, Evalue=5e-12, Organism=Escherichia coli, GI1790162, Length=202, Percent_Identity=29.2079207920792, Blast_Score=64, Evalue=8e-12, Organism=Escherichia coli, GI1786319, Length=213, Percent_Identity=27.2300469483568, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1787112, Length=179, Percent_Identity=31.2849162011173, Blast_Score=64, Evalue=1e-11, Organism=Escherichia coli, GI1789586, Length=199, Percent_Identity=30.1507537688442, Blast_Score=62, Evalue=2e-11, Organism=Escherichia coli, GI2367384, Length=233, Percent_Identity=28.755364806867, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1790525, Length=216, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=3e-11, Organism=Escherichia coli, GI1789890, Length=203, Percent_Identity=28.5714285714286, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI115533592, Length=195, Percent_Identity=32.8205128205128, Blast_Score=71, Evalue=5e-13, Organism=Caenorhabditis elegans, GI71992290, Length=196, Percent_Identity=28.5714285714286, Blast_Score=68, Evalue=5e-12, Organism=Saccharomyces cerevisiae, GI6323217, Length=202, Percent_Identity=30.1980198019802, Blast_Score=76, Evalue=6e-15, Organism=Saccharomyces cerevisiae, GI6322640, Length=191, Percent_Identity=34.5549738219895, Blast_Score=69, Evalue=9e-13, Organism=Drosophila melanogaster, GI24659289, Length=189, Percent_Identity=29.6296296296296, Blast_Score=71, Evalue=7e-13, Organism=Drosophila melanogaster, GI17136662, Length=191, Percent_Identity=31.413612565445, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 - InterPro: IPR012701 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 26169; Mature: 26038
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRLHAKGLTKTFTLHTQGGIVLPVFDNIDLTVKSGECVCLHGPSGAGKSTLLRSLYAN CEEEEEECCCCEEEEEEECCCEEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHC YKPDEGKILVEHMGETVDLLAAEPWEVVEIRRSTIGYVSQFLRVIPRVGALDVVAEPVIA CCCCCCEEEHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHH KGMPAKDARALATTLLTRLRIPERLWSLAPATFSGGEQQRVNIARGFIVDYPVLLLDEPT CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC ASLDASNRATVVDLINEAKSRGAAIVGIFHDEEVRETVADRLFEVGSQGTTTVEPALAGA CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEECHHHCCC GACA CCCC >Mature Secondary Structure TIRLHAKGLTKTFTLHTQGGIVLPVFDNIDLTVKSGECVCLHGPSGAGKSTLLRSLYAN EEEEEECCCCEEEEEEECCCEEEEEECCCEEEEECCCEEEEECCCCCCHHHHHHHHHHC YKPDEGKILVEHMGETVDLLAAEPWEVVEIRRSTIGYVSQFLRVIPRVGALDVVAEPVIA CCCCCCEEEHHHCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCHHHH KGMPAKDARALATTLLTRLRIPERLWSLAPATFSGGEQQRVNIARGFIVDYPVLLLDEPT CCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCC ASLDASNRATVVDLINEAKSRGAAIVGIFHDEEVRETVADRLFEVGSQGTTTVEPALAGA CCCCCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCEECHHHCCC GACA CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]