| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488280
Identifier: 13488280
GI number: 13488280
Start: 251163
End: 252458
Strand: Direct
Name: 13488280
Synonym: mlr9275
Alternate gene names: NA
Gene position: 251163-252458 (Clockwise)
Preceding gene: 13488279
Following gene: 13488281
Centisome position: 71.37
GC content: 61.57
Gene sequence:
>1296_bases ATGCGGAAAAAACTGATTTCCATCCTTGTTGACGGCGTCAGCGCTGACACTTTCGAAAAGCATGCTCATCGCCTGCCCAA CATGCGCCATTTGGCGGAAAGGGGCTTGCGCGTTCGCCGCCTGAAATCAGCCGTTCCGGCCACCTCTGTCCCCGGACGGG CGACGATGTTGACCGGCGTCGGTCCGGAAACTCACGGCATCTATGGCAACCATATCTTCCGCGGCGACGCTTCCGTGGCG CCGCTGGCCGAAGATCTGCTGGTGCCGACGATCGCAACTCATGCCAGGCAGGCTGGCTTGGATGTGGCTGCTATCGGTCA GGCGCTGGTCAATCCCCGCGATACATCGGTCTATGTCTCGCCCTGGTGGCTCCGCGGCTTCATGACGGGCTATCGTTTCA GCAAGATGGTCACGCCGGAAGCGTTGGCGGCATCACGAGCAATCCACGATCCTGAAGATAGGCTAGCCAAGGCCGGGCTG ACGGAGATGGACGCGTTTAGGGATGCTGCCGACGGCGGCGCTCCGCATCTGATCTCGGGCCTGGCGCTCGACCAGTTCCT CAACCGCGCGGTCGTTGCCTTGCTTGGCTCCGACCGGCCGCCGGATCTGTTGCTGACGGAGATCGAGATGCCGGATGCGT TCCAGCATTATCTCGGCTACGACAGCCCGGCGGGAATTTGGTCGGTGGAGTTCGCCGACATGCTGATCGGCAACTTGCTC GCCGTCCTAGAGCGCACCGGGCGCCGCGAGGATTACGTTATAGCCGTCGCCAGCGATCACGGTCATGGCTTTGTCGATAC GGCAATCTTTCCGGAAGCCATCATACCCGACATGCACTGGATGACGGAAGGCGCAAGCCTCTACGTTTCGCTCAAGGCCG CCGGCGATCTCGAGAGGGTGACCGAGCGGCTTTTGCCATATGGCGTTGAGCTCTGGAACGACCACCACGTGCCGGAAAAT CTTCGTGGGACGGTTGCAATGTTTGTCGCTCCACCCCGGCATTCGTTCGAAGAGCGGCCCAGTGATGCATCCGGACCGCT CGTGGCGACCGGTAGTCCGCACCTCATTTCGACCCACGGCTTCCGGCCGGGCAGCCCGGAAGATGATCGCATGTTCATCC TGTCCGGTGGCGGCATTGCACCAAAAGTCATTAAGGCGGCGGATGCCGATCAGTTTGCACCAACGCTGGCGAGCGTGCTC GGCCTGCCGTTGGAGCCTTACGCTGGGCGGTCCCTGATCGCAGAAGAGAGCCCCATAGCGCGGAGCCCGCAATCGCTTGA ACTGCACCTCAAGTAA
Upstream 100 bases:
>100_bases CCCCAGCATCGTCATCGTGCTGACGGCCGTCGCCGTCAGCGTTTTGGGCGATTTCTTGCGCGACAAACTCGATCCCACTC TCAAGTAACGGATATCTCCC
Downstream 100 bases:
>100_bases ATCGAAGAAGATGTCCAATGTGGTTACAAATCTCCAACGCGCGCATTGTGTGCGAAGATCATTTAGTAGAGGCGGGCCTC GCAATCTGCGATGGCCTTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 431; Mature: 431
Protein sequence:
>431_residues MRKKLISILVDGVSADTFEKHAHRLPNMRHLAERGLRVRRLKSAVPATSVPGRATMLTGVGPETHGIYGNHIFRGDASVA PLAEDLLVPTIATHARQAGLDVAAIGQALVNPRDTSVYVSPWWLRGFMTGYRFSKMVTPEALAASRAIHDPEDRLAKAGL TEMDAFRDAADGGAPHLISGLALDQFLNRAVVALLGSDRPPDLLLTEIEMPDAFQHYLGYDSPAGIWSVEFADMLIGNLL AVLERTGRREDYVIAVASDHGHGFVDTAIFPEAIIPDMHWMTEGASLYVSLKAAGDLERVTERLLPYGVELWNDHHVPEN LRGTVAMFVAPPRHSFEERPSDASGPLVATGSPHLISTHGFRPGSPEDDRMFILSGGGIAPKVIKAADADQFAPTLASVL GLPLEPYAGRSLIAEESPIARSPQSLELHLK
Sequences:
>Translated_431_residues MRKKLISILVDGVSADTFEKHAHRLPNMRHLAERGLRVRRLKSAVPATSVPGRATMLTGVGPETHGIYGNHIFRGDASVA PLAEDLLVPTIATHARQAGLDVAAIGQALVNPRDTSVYVSPWWLRGFMTGYRFSKMVTPEALAASRAIHDPEDRLAKAGL TEMDAFRDAADGGAPHLISGLALDQFLNRAVVALLGSDRPPDLLLTEIEMPDAFQHYLGYDSPAGIWSVEFADMLIGNLL AVLERTGRREDYVIAVASDHGHGFVDTAIFPEAIIPDMHWMTEGASLYVSLKAAGDLERVTERLLPYGVELWNDHHVPEN LRGTVAMFVAPPRHSFEERPSDASGPLVATGSPHLISTHGFRPGSPEDDRMFILSGGGIAPKVIKAADADQFAPTLASVL GLPLEPYAGRSLIAEESPIARSPQSLELHLK >Mature_431_residues MRKKLISILVDGVSADTFEKHAHRLPNMRHLAERGLRVRRLKSAVPATSVPGRATMLTGVGPETHGIYGNHIFRGDASVA PLAEDLLVPTIATHARQAGLDVAAIGQALVNPRDTSVYVSPWWLRGFMTGYRFSKMVTPEALAASRAIHDPEDRLAKAGL TEMDAFRDAADGGAPHLISGLALDQFLNRAVVALLGSDRPPDLLLTEIEMPDAFQHYLGYDSPAGIWSVEFADMLIGNLL AVLERTGRREDYVIAVASDHGHGFVDTAIFPEAIIPDMHWMTEGASLYVSLKAAGDLERVTERLLPYGVELWNDHHVPEN LRGTVAMFVAPPRHSFEERPSDASGPLVATGSPHLISTHGFRPGSPEDDRMFILSGGGIAPKVIKAADADQFAPTLASVL GLPLEPYAGRSLIAEESPIARSPQSLELHLK
Specific function: Unknown
COG id: COG1524
COG function: function code R; Uncharacterized proteins of the AP superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46655; Mature: 46655
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKKLISILVDGVSADTFEKHAHRLPNMRHLAERGLRVRRLKSAVPATSVPGRATMLTGV CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECC GPETHGIYGNHIFRGDASVAPLAEDLLVPTIATHARQAGLDVAAIGQALVNPRDTSVYVS CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEC PWWLRGFMTGYRFSKMVTPEALAASRAIHDPEDRLAKAGLTEMDAFRDAADGGAPHLISG HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH LALDQFLNRAVVALLGSDRPPDLLLTEIEMPDAFQHYLGYDSPAGIWSVEFADMLIGNLL HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHH AVLERTGRREDYVIAVASDHGHGFVDTAIFPEAIIPDMHWMTEGASLYVSLKAAGDLERV HHHHHCCCCCCEEEEEECCCCCCEEHHHHCCHHHCCCHHHHCCCCEEEEEEECCCCHHHH TERLLPYGVELWNDHHVPENLRGTVAMFVAPPRHSFEERPSDASGPLVATGSPHLISTHG HHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCEEECCCCCEEEECC FRPGSPEDDRMFILSGGGIAPKVIKAADADQFAPTLASVLGLPLEPYAGRSLIAEESPIA CCCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC RSPQSLELHLK CCCCCEEEEEC >Mature Secondary Structure MRKKLISILVDGVSADTFEKHAHRLPNMRHLAERGLRVRRLKSAVPATSVPGRATMLTGV CHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECC GPETHGIYGNHIFRGDASVAPLAEDLLVPTIATHARQAGLDVAAIGQALVNPRDTSVYVS CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEC PWWLRGFMTGYRFSKMVTPEALAASRAIHDPEDRLAKAGLTEMDAFRDAADGGAPHLISG HHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHCCCCCCHHHHH LALDQFLNRAVVALLGSDRPPDLLLTEIEMPDAFQHYLGYDSPAGIWSVEFADMLIGNLL HHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEHHHHHHHHHHHH AVLERTGRREDYVIAVASDHGHGFVDTAIFPEAIIPDMHWMTEGASLYVSLKAAGDLERV HHHHHCCCCCCEEEEEECCCCCCEEHHHHCCHHHCCCHHHHCCCCEEEEEEECCCCHHHH TERLLPYGVELWNDHHVPENLRGTVAMFVAPPRHSFEERPSDASGPLVATGSPHLISTHG HHHHHHCCHHHCCCCCCCCCCCCCEEEEEECCCCCHHCCCCCCCCCEEECCCCCEEEECC FRPGSPEDDRMFILSGGGIAPKVIKAADADQFAPTLASVLGLPLEPYAGRSLIAEESPIA CCCCCCCCCEEEEEECCCCCHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCEEECCCCCCC RSPQSLELHLK CCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA