| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is gsiC [H]
Identifier: 13488278
GI number: 13488278
Start: 249366
End: 250307
Strand: Direct
Name: gsiC [H]
Synonym: mlr9272
Alternate gene names: 13488278
Gene position: 249366-250307 (Clockwise)
Preceding gene: 13488277
Following gene: 13488279
Centisome position: 70.86
GC content: 62.95
Gene sequence:
>942_bases ATGACCGGCTTGCTCCCTTACATCGGCCCCAAACTTCTGCGGGCCGCGCTCTCGATCATCGTCGTCGTGACGATCACATT CTTCGTGCTACGCGCTTCAGGAGATCCGGCCCTGCAGATTCTCGGGCCCGGCGCTCGCGCCCCCGACCTCGAAGCGTTTC GCCAGCGGTGGGGATTGGATCAGCCCCTGCACGTTCAATATCTTCGCTATCTCTGGGGCGCGTTGCACGGCGATTTCGGC AACTCGATGCTGGCCGGCAAGCCCGCCGCGGAGCTTGTGCTTGGGCGAATGCCTTTGACGTTGGCCCTGATGCTGCCGGC ACTCGCGCTCAACGTGCTGATCGGCATCCCGGTCGGCGCCTATGCGGCCATGCATCGAGACAGCTGGATCGACCGGTCGG TGATGATGCTGACCGTGCTCGGCTTTACCGTGCCAAGCTTCGTGCTCGGCTTGCTGTTCATCCTGATATTTTCGGTGACG CTCGGCCTGTTTCCCTCAGGCGGGGCCGACAAATGGCAAAGCTTTGTTCTGCCGGTGCTGACGCTTGGCATAGGCGGGGC GGCAATGCTCGCGCGGTTTACGCGTAGCGCCATGATCGAGGTTCTGTCGCAGCTCTACGTCGTTGCCGCCAGCGCCAAGG GCGTCACCTGGCGCCAGGTCATTCACCACCACGCCTTCCCCAACGCCATCATCCCGATTCTCACATTGCTGGGTCTGATG CTGGGCGGACAGGTGGCCGGGGCGGTGCTGGTCGAAAACGTCTTCGGCTGGCCGGGCATTGGTCAACTGCTCGTGGTCTC CGTCGGCAATCGAGATCTCGCGGTCGTGCAGGTCATCCTCCTGCTCGTGGCACTCACCATGACGTCGGCGAACCTGATGA TGGATCTGCTCTACGGCGTCGTCGATCCCCGCTTGCGACAAGCGCGCCCGGGATCACACTGA
Upstream 100 bases:
>100_bases CGCGCTGTCGTCTGGCAAAAGATATCTGCCGGCAGACGCAACCTGAACTCCTTCCACACGGACCAGAACGGCGGGTCGCC TGCCATCTGGTATCAATTCC
Downstream 100 bases:
>100_bases GGAAGCCAGATGCAGAAGAAGTCACGGATTGACCTGCCGACGCTCTTTGCGTCGCTCTGGCTTTGCCTGATGCTGCTGAT CGCGGCGGCCGCGCCGCTGA
Product: ABC transporter permease
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 313; Mature: 312
Protein sequence:
>313_residues MTGLLPYIGPKLLRAALSIIVVVTITFFVLRASGDPALQILGPGARAPDLEAFRQRWGLDQPLHVQYLRYLWGALHGDFG NSMLAGKPAAELVLGRMPLTLALMLPALALNVLIGIPVGAYAAMHRDSWIDRSVMMLTVLGFTVPSFVLGLLFILIFSVT LGLFPSGGADKWQSFVLPVLTLGIGGAAMLARFTRSAMIEVLSQLYVVAASAKGVTWRQVIHHHAFPNAIIPILTLLGLM LGGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLLVALTMTSANLMMDLLYGVVDPRLRQARPGSH
Sequences:
>Translated_313_residues MTGLLPYIGPKLLRAALSIIVVVTITFFVLRASGDPALQILGPGARAPDLEAFRQRWGLDQPLHVQYLRYLWGALHGDFG NSMLAGKPAAELVLGRMPLTLALMLPALALNVLIGIPVGAYAAMHRDSWIDRSVMMLTVLGFTVPSFVLGLLFILIFSVT LGLFPSGGADKWQSFVLPVLTLGIGGAAMLARFTRSAMIEVLSQLYVVAASAKGVTWRQVIHHHAFPNAIIPILTLLGLM LGGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLLVALTMTSANLMMDLLYGVVDPRLRQARPGSH >Mature_312_residues TGLLPYIGPKLLRAALSIIVVVTITFFVLRASGDPALQILGPGARAPDLEAFRQRWGLDQPLHVQYLRYLWGALHGDFGN SMLAGKPAAELVLGRMPLTLALMLPALALNVLIGIPVGAYAAMHRDSWIDRSVMMLTVLGFTVPSFVLGLLFILIFSVTL GLFPSGGADKWQSFVLPVLTLGIGGAAMLARFTRSAMIEVLSQLYVVAASAKGVTWRQVIHHHAFPNAIIPILTLLGLML GGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLLVALTMTSANLMMDLLYGVVDPRLRQARPGSH
Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1787053, Length=304, Percent_Identity=42.7631578947368, Blast_Score=239, Evalue=3e-64, Organism=Escherichia coli, GI1789888, Length=314, Percent_Identity=35.9872611464968, Blast_Score=197, Evalue=9e-52, Organism=Escherichia coli, GI1789965, Length=325, Percent_Identity=36.3076923076923, Blast_Score=187, Evalue=7e-49, Organism=Escherichia coli, GI1787497, Length=308, Percent_Identity=33.7662337662338, Blast_Score=170, Evalue=1e-43, Organism=Escherichia coli, GI1787761, Length=314, Percent_Identity=37.8980891719745, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI1787550, Length=262, Percent_Identity=30.1526717557252, Blast_Score=128, Evalue=6e-31, Organism=Escherichia coli, GI1788504, Length=287, Percent_Identity=27.8745644599303, Blast_Score=117, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 33539; Mature: 33408
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLLPYIGPKLLRAALSIIVVVTITFFVLRASGDPALQILGPGARAPDLEAFRQRWGLD CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCC QPLHVQYLRYLWGALHGDFGNSMLAGKPAAELVLGRMPLTLALMLPALALNVLIGIPVGA CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH YAAMHRDSWIDRSVMMLTVLGFTVPSFVLGLLFILIFSVTLGLFPSGGADKWQSFVLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TLGIGGAAMLARFTRSAMIEVLSQLYVVAASAKGVTWRQVIHHHAFPNAIIPILTLLGLM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH LGGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLLVALTMTSANLMMDLLYGV HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPRLRQARPGSH HCHHHHCCCCCCC >Mature Secondary Structure TGLLPYIGPKLLRAALSIIVVVTITFFVLRASGDPALQILGPGARAPDLEAFRQRWGLD CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHCCCC QPLHVQYLRYLWGALHGDFGNSMLAGKPAAELVLGRMPLTLALMLPALALNVLIGIPVGA CCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHH YAAMHRDSWIDRSVMMLTVLGFTVPSFVLGLLFILIFSVTLGLFPSGGADKWQSFVLPVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH TLGIGGAAMLARFTRSAMIEVLSQLYVVAASAKGVTWRQVIHHHAFPNAIIPILTLLGLM HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHH LGGQVAGAVLVENVFGWPGIGQLLVVSVGNRDLAVVQVILLLVALTMTSANLMMDLLYGV HHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH VDPRLRQARPGSH HCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA