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The map label for this gene is ooxB [H]

Identifier: 13488188

GI number: 13488188

Start: 20691

End: 22040

Strand: Direct

Name: ooxB [H]

Synonym: mlr9020

Alternate gene names: 13488188

Gene position: 20691-22040 (Clockwise)

Preceding gene: 13488187

Following gene: 13488189

Centisome position: 5.88

GC content: 56.67

Gene sequence:

>1350_bases
ATGACCGATCCGAGCACCGAATTTTCCTCCATCACACACCAAGTAAATCAGACGCCCAGGCCGATCCCCGCGAGAGCAGA
TGTTGTGGTGGTAGGCGCCGGCATCATCGGAACTGCCACCGCCCTGTTCCTTGCACTACGGGGGCTGTCTGTCGTCGTGT
GTGAAAAAGGTCATGTCGCATGCGAGCAATCCAGCCGCAATTGGGGGTGGGTGCGCAAGATGGGGCGCGATCCAGCCGAG
CTACCCATGGCTATCGCCAGCGCCAAGCTATGGGCTGGGATGAACGCGCTTACAGGCATCGAGACAGGATTCCGCGAAAC
CGGCATCTACTATTTGTGCAAAGACCAGAAGGACATCCAAAAGTACGAAGAATGGCTAGCTTTCGCCAAGGTGCATGATC
TCGATTCCTCCCTACTTAGGCAAAGTGGTTTGAAAGAGCGTTTCCCAACGCTCAAGGGTCATTGGGAAGGTGCGCTATTT
ACCAAAAGCGATGGACGCGCCGAACCTTCCATGGCGACGCAAGCCATGGCGGCTTCATTACGCACACGCGGCGGGCAGAT
CATTGAAGATTGTGCTGTGCGTTGCATTGAAACAGCGGGGGGCTCGGTCCATTCCGTCGTTACGGAGCATGGGGAGATTC
GCTGCAAGTCCGTCGTCCTGGCGACCGGTGCCTGGACGAGACTATTCTGCGGCAACTTGGGCATCGATTTCCCGCAGTTG
AAAGTCATCGGATCGGTCATGCGCACACAACGGCTCGACGGGCCTCCTGAGTGTGCGGTCGCCGGTCGGGATTTCGCTTT
TCGCAAGCGCTTTGACGGTGGCTATACGATAGCCCAGAAGAACGCAAACATCGCGCAAATCGTTCCGGATAGCTTCCGTT
TGTTCTTCCAGTTCCTTCCCGCCTTTCGGTCGGAAGGGAATGAAATACGACTTCGCTTCGGCAGTCAGTTCTTTAGGGAA
ATGAACATCCCGAAGAGGTGGCGATCGGATCAGGTCACCCCCTTCGAAACAACCCGGATTCTCAACCCAAAGCCTTCGGA
AACGATCCTTAACGCGGGGCTAAGCAACCTAAGGAAAGTGTTCCCTGAGTTTGGCAATGCGAAGGTCGAAGAAAGCTGGG
GATGCGCTATCGATGTCACGCCGGATGCGGTGCCCGTGATCGACACGGTCGGCAAAACTCCGGGCTTGGTAATCGCCAGC
GGTTTCTCGGGCCATGGATTTGGGATCGGGCCGGCGGCAGCCCATCTAGTCGCTGATATGGTCACGGCCCAAAGGCCTAT
CGTACCTGCAGAGCCGTTCAAATTGGCTCGGTTGAAGCAGGCCAGAAGGCAAGAGTCGGGCTCCACTTGA

Upstream 100 bases:

>100_bases
AAGGGATCGGAACCGACGATCCGGGCATGGTTGCATTGCAGGTTGCCGTATCGGCCATGGCAGGGTCGCTGTCTGATCGA
GTAGTGGGCGGATCCAACAA

Downstream 100 bases:

>100_bases
CGCGGGCCACATTTCAAACAACGTGACGACGCCAGCACCACCCAAGCCTGCTGCGGGCGTTACGAAGATGGATATTTCAA
ATGCATCCAGACAACTGAGC

Product: AgaE protein

Products: NA

Alternate protein names: Octopine oxidase subunit B [H]

Number of amino acids: Translated: 449; Mature: 448

Protein sequence:

>449_residues
MTDPSTEFSSITHQVNQTPRPIPARADVVVVGAGIIGTATALFLALRGLSVVVCEKGHVACEQSSRNWGWVRKMGRDPAE
LPMAIASAKLWAGMNALTGIETGFRETGIYYLCKDQKDIQKYEEWLAFAKVHDLDSSLLRQSGLKERFPTLKGHWEGALF
TKSDGRAEPSMATQAMAASLRTRGGQIIEDCAVRCIETAGGSVHSVVTEHGEIRCKSVVLATGAWTRLFCGNLGIDFPQL
KVIGSVMRTQRLDGPPECAVAGRDFAFRKRFDGGYTIAQKNANIAQIVPDSFRLFFQFLPAFRSEGNEIRLRFGSQFFRE
MNIPKRWRSDQVTPFETTRILNPKPSETILNAGLSNLRKVFPEFGNAKVEESWGCAIDVTPDAVPVIDTVGKTPGLVIAS
GFSGHGFGIGPAAAHLVADMVTAQRPIVPAEPFKLARLKQARRQESGST

Sequences:

>Translated_449_residues
MTDPSTEFSSITHQVNQTPRPIPARADVVVVGAGIIGTATALFLALRGLSVVVCEKGHVACEQSSRNWGWVRKMGRDPAE
LPMAIASAKLWAGMNALTGIETGFRETGIYYLCKDQKDIQKYEEWLAFAKVHDLDSSLLRQSGLKERFPTLKGHWEGALF
TKSDGRAEPSMATQAMAASLRTRGGQIIEDCAVRCIETAGGSVHSVVTEHGEIRCKSVVLATGAWTRLFCGNLGIDFPQL
KVIGSVMRTQRLDGPPECAVAGRDFAFRKRFDGGYTIAQKNANIAQIVPDSFRLFFQFLPAFRSEGNEIRLRFGSQFFRE
MNIPKRWRSDQVTPFETTRILNPKPSETILNAGLSNLRKVFPEFGNAKVEESWGCAIDVTPDAVPVIDTVGKTPGLVIAS
GFSGHGFGIGPAAAHLVADMVTAQRPIVPAEPFKLARLKQARRQESGST
>Mature_448_residues
TDPSTEFSSITHQVNQTPRPIPARADVVVVGAGIIGTATALFLALRGLSVVVCEKGHVACEQSSRNWGWVRKMGRDPAEL
PMAIASAKLWAGMNALTGIETGFRETGIYYLCKDQKDIQKYEEWLAFAKVHDLDSSLLRQSGLKERFPTLKGHWEGALFT
KSDGRAEPSMATQAMAASLRTRGGQIIEDCAVRCIETAGGSVHSVVTEHGEIRCKSVVLATGAWTRLFCGNLGIDFPQLK
VIGSVMRTQRLDGPPECAVAGRDFAFRKRFDGGYTIAQKNANIAQIVPDSFRLFFQFLPAFRSEGNEIRLRFGSQFFREM
NIPKRWRSDQVTPFETTRILNPKPSETILNAGLSNLRKVFPEFGNAKVEESWGCAIDVTPDAVPVIDTVGKTPGLVIASG
FSGHGFGIGPAAAHLVADMVTAQRPIVPAEPFKLARLKQARRQESGST

Specific function: Oxidative cleavage of octopine into L-arginine and pyruvate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI197927446, Length=252, Percent_Identity=25, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI21361378, Length=252, Percent_Identity=25, Blast_Score=88, Evalue=2e-17,
Organism=Homo sapiens, GI24797151, Length=423, Percent_Identity=20.5673758865248, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI194306651, Length=206, Percent_Identity=27.6699029126214, Blast_Score=68, Evalue=2e-11,
Organism=Drosophila melanogaster, GI20130091, Length=433, Percent_Identity=22.4018475750577, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI28571104, Length=424, Percent_Identity=23.1132075471698, Blast_Score=77, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006076 [H]

Pfam domain/function: PF01266 DAO [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 49082; Mature: 48951

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS00196 COPPER_BLUE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPSTEFSSITHQVNQTPRPIPARADVVVVGAGIIGTATALFLALRGLSVVVCEKGHVA
CCCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEE
CEQSSRNWGWVRKMGRDPAELPMAIASAKLWAGMNALTGIETGFRETGIYYLCKDQKDIQ
ECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHCCEEEEECCHHHHH
KYEEWLAFAKVHDLDSSLLRQSGLKERFPTLKGHWEGALFTKSDGRAEPSMATQAMAASL
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
RTRGGQIIEDCAVRCIETAGGSVHSVVTEHGEIRCKSVVLATGAWTRLFCGNLGIDFPQL
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCHHH
KVIGSVMRTQRLDGPPECAVAGRDFAFRKRFDGGYTIAQKNANIAQIVPDSFRLFFQFLP
HHHHHHHHHHCCCCCCCCEECCCCHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHH
AFRSEGNEIRLRFGSQFFREMNIPKRWRSDQVTPFETTRILNPKPSETILNAGLSNLRKV
HHHCCCCEEEEEHHHHHHHHCCCCHHCCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHH
FPEFGNAKVEESWGCAIDVTPDAVPVIDTVGKTPGLVIASGFSGHGFGIGPAAAHLVADM
HHHHCCCEEECCCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
VTAQRPIVPAEPFKLARLKQARRQESGST
HHHCCCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDPSTEFSSITHQVNQTPRPIPARADVVVVGAGIIGTATALFLALRGLSVVVCEKGHVA
CCCCHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHCCCEEEEECCCCEE
CEQSSRNWGWVRKMGRDPAELPMAIASAKLWAGMNALTGIETGFRETGIYYLCKDQKDIQ
ECCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHCCHHHCCEEEEECCHHHHH
KYEEWLAFAKVHDLDSSLLRQSGLKERFPTLKGHWEGALFTKSDGRAEPSMATQAMAASL
HHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHH
RTRGGQIIEDCAVRCIETAGGSVHSVVTEHGEIRCKSVVLATGAWTRLFCGNLGIDFPQL
HHCCCHHHHHHHHHHHHHCCCCHHHHHHHCCCEEEEEEEEECCCHHHHHHCCCCCCCHHH
KVIGSVMRTQRLDGPPECAVAGRDFAFRKRFDGGYTIAQKNANIAQIVPDSFRLFFQFLP
HHHHHHHHHHCCCCCCCCEECCCCHHHHHHCCCCEEEEECCCCEEEECCHHHHHHHHHHH
AFRSEGNEIRLRFGSQFFREMNIPKRWRSDQVTPFETTRILNPKPSETILNAGLSNLRKV
HHHCCCCEEEEEHHHHHHHHCCCCHHCCCCCCCCCHHEECCCCCCHHHHHHHHHHHHHHH
FPEFGNAKVEESWGCAIDVTPDAVPVIDTVGKTPGLVIASGFSGHGFGIGPAAAHLVADM
HHHHCCCEEECCCCEEEECCCCCCHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHH
VTAQRPIVPAEPFKLARLKQARRQESGST
HHHCCCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481432 [H]