| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488147
Identifier: 13488147
GI number: 13488147
Start: 286443
End: 286973
Strand: Reverse
Name: 13488147
Synonym: mll9325
Alternate gene names: NA
Gene position: 286973-286443 (Counterclockwise)
Preceding gene: 13488148
Following gene: 13488146
Centisome position: 81.55
GC content: 58.57
Gene sequence:
>531_bases GTGGCCGATGAGACGAATTTTTCCAAGGACAAGCGACATCGCTTCCTGTCACGGGCGGCGACCGCCGCTTGGGACGCGAT CATCATCACGCACAGCGCCTTTCGCTTCATCGGCGTGCCGTCGGCATTCGAGCAACAGATGATCCACGACGAACTGGAAC TCTACGAGAGGCTGCTGACCAAGGTCGAGAGCGACGACCGCGTCTCGCGCAAGCGTCTCGAGCGGCTGAAGGAGGGGCTC AAGGAACGGCTGGAGGCGCTGGCGACTCGCAAGGACGACCTGCTCACCATCTCCGAGATCGGCGTCGACCAGATCATCGT CGATGAAGCCCAGGAGTTCAGTTATGCGCAGATCGATATTATGTGCAGCTCACCGTGCGGCGTAAAAGTGCCAGCGCAAT TGGCTAACGCTGAACTGCACATAATAAAGTTAGAGTGCCTGCAGGAACTGCATCAAGGCGTCGGGTGGCCTATAGCGGGT TCTCCCAGTTTGCAGAGGTTGGAGACGCGCAAGAGCGCGCTCCTTCATTGA
Upstream 100 bases:
>100_bases AGCGCCGCCAACCTAAAAACGCTCTCTATTATCTCGAGCTCGAGATAATGTCCAGGCGGCCCGCGAATTTCTGGCGCTCT ATCCGACCGCGCGAATCCTC
Downstream 100 bases:
>100_bases TAAATCAGCCTGAAGATAGTTGTGCGTCGTCGTCGGGCTTTCGTGGCCGAGCCAAAGCGCGATTACAGAGATATCAACTC CGGACTGCAGGAGGTGCATT
Product: hypothetical protein
Products: NA
Alternate protein names: Helicase SNF2 Family; DNA Methylase; Helicase Domain-Containing Protein; Helicase-Like; N-6 DNA Methylase Family; DNA Adenine Methyltransferase; DEAD-Like Helicase; Methyltransferase Type; SNF-2-Family Methyltransferase; Helicase; Methylase; Methylase Protein
Number of amino acids: Translated: 176; Mature: 175
Protein sequence:
>176_residues MADETNFSKDKRHRFLSRAATAAWDAIIITHSAFRFIGVPSAFEQQMIHDELELYERLLTKVESDDRVSRKRLERLKEGL KERLEALATRKDDLLTISEIGVDQIIVDEAQEFSYAQIDIMCSSPCGVKVPAQLANAELHIIKLECLQELHQGVGWPIAG SPSLQRLETRKSALLH
Sequences:
>Translated_176_residues MADETNFSKDKRHRFLSRAATAAWDAIIITHSAFRFIGVPSAFEQQMIHDELELYERLLTKVESDDRVSRKRLERLKEGL KERLEALATRKDDLLTISEIGVDQIIVDEAQEFSYAQIDIMCSSPCGVKVPAQLANAELHIIKLECLQELHQGVGWPIAG SPSLQRLETRKSALLH >Mature_175_residues ADETNFSKDKRHRFLSRAATAAWDAIIITHSAFRFIGVPSAFEQQMIHDELELYERLLTKVESDDRVSRKRLERLKEGLK ERLEALATRKDDLLTISEIGVDQIIVDEAQEFSYAQIDIMCSSPCGVKVPAQLANAELHIIKLECLQELHQGVGWPIAGS PSLQRLETRKSALLH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19967; Mature: 19836
Theoretical pI: Translated: 5.95; Mature: 5.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADETNFSKDKRHRFLSRAATAAWDAIIITHSAFRFIGVPSAFEQQMIHDELELYERLLT CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KVESDDRVSRKRLERLKEGLKERLEALATRKDDLLTISEIGVDQIIVDEAQEFSYAQIDI HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHCCEEEEEE MCSSPCGVKVPAQLANAELHIIKLECLQELHQGVGWPIAGSPSLQRLETRKSALLH EECCCCCCCCCHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure ADETNFSKDKRHRFLSRAATAAWDAIIITHSAFRFIGVPSAFEQQMIHDELELYERLLT CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH KVESDDRVSRKRLERLKEGLKERLEALATRKDDLLTISEIGVDQIIVDEAQEFSYAQIDI HCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHCCHHHHHHHHHHCCEEEEEE MCSSPCGVKVPAQLANAELHIIKLECLQELHQGVGWPIAGSPSLQRLETRKSALLH EECCCCCCCCCHHHCCCEEEEEHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA