| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488142
Identifier: 13488142
GI number: 13488142
Start: 276649
End: 277122
Strand: Reverse
Name: 13488142
Synonym: mll9311
Alternate gene names: NA
Gene position: 277122-276649 (Counterclockwise)
Preceding gene: 13488143
Following gene: 13488141
Centisome position: 78.75
GC content: 61.39
Gene sequence:
>474_bases ATGTCGGCTCAATTGATCTATGACCTCGTTCCACTCGGTTCGATCGTGAATTATTCCGACGGATCACCCCGCCCGGCAGA CCGGCATCGCAAAAAGCTCGCAGCCTGGGAAAATCGCAACGGTGGCGGCCGCCTTATCCGCAAACAGGCCGAGGCCCGCG TCGGCAATACGACGCTGCCCTCGATCACCCTGCACAAGGGTGATTATGGCAGTCAGGGAACCATCGTGCTGCGCGTCCAC CAGACGTTTTCGGTGAACAGCGACCTGAAGTTTTCGGCCAACGAACGGCCCGCCATAGGCACGGTTCTCGTTCTCGACCG CGCCGGCGACGATGCGGAGCTTGTCCATCTTGCCGCCAATCGCACGGGCGCCGAGGAATGGCTTACCCGCCACGGCTATC CGAACGCGGTTTTGCAGCAAGTCACGGCCAACACCGTAGCGGTGGATGCCGTAGAGGGGAGGACGGCAGCATGA
Upstream 100 bases:
>100_bases GAATAGCGGCGCGCGCCTTCTTCCTTCCGTTCGCATTCCCGCCGCCGGTGACCTAACCGGCGGCGGTTTTGTTTTCACCA TGAGCAACACGGAGACCATC
Downstream 100 bases:
>100_bases CTGCGCGAACTTCTGAAACCCATGTCGTCGAAACCACCCCCGGTTTTCCGGGAGTTTCTTTTGGCCGAAGCGCCGATGGG CTTTGCGTTGCCCTTGTTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 157; Mature: 156
Protein sequence:
>157_residues MSAQLIYDLVPLGSIVNYSDGSPRPADRHRKKLAAWENRNGGGRLIRKQAEARVGNTTLPSITLHKGDYGSQGTIVLRVH QTFSVNSDLKFSANERPAIGTVLVLDRAGDDAELVHLAANRTGAEEWLTRHGYPNAVLQQVTANTVAVDAVEGRTAA
Sequences:
>Translated_157_residues MSAQLIYDLVPLGSIVNYSDGSPRPADRHRKKLAAWENRNGGGRLIRKQAEARVGNTTLPSITLHKGDYGSQGTIVLRVH QTFSVNSDLKFSANERPAIGTVLVLDRAGDDAELVHLAANRTGAEEWLTRHGYPNAVLQQVTANTVAVDAVEGRTAA >Mature_156_residues SAQLIYDLVPLGSIVNYSDGSPRPADRHRKKLAAWENRNGGGRLIRKQAEARVGNTTLPSITLHKGDYGSQGTIVLRVHQ TFSVNSDLKFSANERPAIGTVLVLDRAGDDAELVHLAANRTGAEEWLTRHGYPNAVLQQVTANTVAVDAVEGRTAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16953; Mature: 16822
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 0.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAQLIYDLVPLGSIVNYSDGSPRPADRHRKKLAAWENRNGGGRLIRKQAEARVGNTTLP CCCCCEEEHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC SITLHKGDYGSQGTIVLRVHQTFSVNSDLKFSANERPAIGTVLVLDRAGDDAELVHLAAN EEEEECCCCCCCCEEEEEEECEEECCCCEEECCCCCCCEEEEEEEECCCCCCEEEEEECC RTGAEEWLTRHGYPNAVLQQVTANTVAVDAVEGRTAA CCCHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCC >Mature Secondary Structure SAQLIYDLVPLGSIVNYSDGSPRPADRHRKKLAAWENRNGGGRLIRKQAEARVGNTTLP CCCCEEEHHCCCCEEECCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCC SITLHKGDYGSQGTIVLRVHQTFSVNSDLKFSANERPAIGTVLVLDRAGDDAELVHLAAN EEEEECCCCCCCCEEEEEEECEEECCCCEEECCCCCCCEEEEEEEECCCCCCEEEEEECC RTGAEEWLTRHGYPNAVLQQVTANTVAVDAVEGRTAA CCCHHHHHHHCCCCHHHHHHHHCCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA