| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is 13488124
Identifier: 13488124
GI number: 13488124
Start: 206272
End: 206754
Strand: Reverse
Name: 13488124
Synonym: mll9223
Alternate gene names: NA
Gene position: 206754-206272 (Counterclockwise)
Preceding gene: 13488125
Following gene: 13488123
Centisome position: 58.75
GC content: 51.97
Gene sequence:
>483_bases ATGATCGGGCAACAGCCGACAAAGGAAGTCACAATAATCTCGACTTCAGACGGAACCGATCTCGCGTTCAAGGACATTTT GCAAGCCAAACTTTTTGTCGCAGTAAGTAGCGCCGGTGTCAGAAAACCCAGACGCCAGATAAAAATGTCTAGCCCTTACA TTATCTTCTTCAACGGCAAGCATGAGGCGGTTGGCAGATGGGCGGTTTGTGGAAATCCATTGAGAGACAAGTTCAGTGGC CGCTTTTCCATATCCGTTACCTTGGTATCCTCGACCTACGCGAAAGCTGTGCAAGGTAATCACGCCTGGCGGGGCCCATT CAGGCAAGGCCGCTTGTTCACGCAGGACAAAGAAGCCAACGATCTGATGGCGGACATCGACTGCAAATGGGTGCTCCAGG TCGGGGCGTGCGTTACCTTGAAGCTCGGAGAACACAAAATCCAACTCGTCGACAAACCGTTCTTGCTCGGGCTCGAGCTC TAA
Upstream 100 bases:
>100_bases AATTCCGGCGCTTCGACTTCAGCTTCGCCGCTTCACGCTCGAGGTACTGGATCAGTTTGAGAGTCTGAACGGGTATAGCA AGAGCGATTTGACCGCTGCG
Downstream 100 bases:
>100_bases GTGGGCGACGCGAGCTCGATCAAAATGAGATAAAGTCTTCAGCGTCGCGTGCATGCGGGCTAGATCTCCCTTTCGGTGGA AGTTGTAGCCTCTGATGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MIGQQPTKEVTIISTSDGTDLAFKDILQAKLFVAVSSAGVRKPRRQIKMSSPYIIFFNGKHEAVGRWAVCGNPLRDKFSG RFSISVTLVSSTYAKAVQGNHAWRGPFRQGRLFTQDKEANDLMADIDCKWVLQVGACVTLKLGEHKIQLVDKPFLLGLEL
Sequences:
>Translated_160_residues MIGQQPTKEVTIISTSDGTDLAFKDILQAKLFVAVSSAGVRKPRRQIKMSSPYIIFFNGKHEAVGRWAVCGNPLRDKFSG RFSISVTLVSSTYAKAVQGNHAWRGPFRQGRLFTQDKEANDLMADIDCKWVLQVGACVTLKLGEHKIQLVDKPFLLGLEL >Mature_160_residues MIGQQPTKEVTIISTSDGTDLAFKDILQAKLFVAVSSAGVRKPRRQIKMSSPYIIFFNGKHEAVGRWAVCGNPLRDKFSG RFSISVTLVSSTYAKAVQGNHAWRGPFRQGRLFTQDKEANDLMADIDCKWVLQVGACVTLKLGEHKIQLVDKPFLLGLEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17767; Mature: 17767
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGQQPTKEVTIISTSDGTDLAFKDILQAKLFVAVSSAGVRKPRRQIKMSSPYIIFFNGK CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCEEEEECCC HEAVGRWAVCGNPLRDKFSGRFSISVTLVSSTYAKAVQGNHAWRGPFRQGRLFTQDKEAN CCCCEEEEECCCCCHHHCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCEEECCCCCC DLMADIDCKWVLQVGACVTLKLGEHKIQLVDKPFLLGLEL CEEECCCEEEEEEECCEEEEEECCEEEEEECCCEEEEECC >Mature Secondary Structure MIGQQPTKEVTIISTSDGTDLAFKDILQAKLFVAVSSAGVRKPRRQIKMSSPYIIFFNGK CCCCCCCCEEEEEECCCCCCHHHHHHHHHHHEEEECCCCCCCCHHHEECCCCEEEEECCC HEAVGRWAVCGNPLRDKFSGRFSISVTLVSSTYAKAVQGNHAWRGPFRQGRLFTQDKEAN CCCCEEEEECCCCCHHHCCCEEEEEEEEEECHHHHHHCCCCCCCCCCCCCCEEECCCCCC DLMADIDCKWVLQVGACVTLKLGEHKIQLVDKPFLLGLEL CEEECCCEEEEEEECCEEEEEECCEEEEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA