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The map label for this gene is fnr [C]

Identifier: 13488119

GI number: 13488119

Start: 177039

End: 177443

Strand: Reverse

Name: fnr [C]

Synonym: mll9196

Alternate gene names: 13488119

Gene position: 177443-177039 (Counterclockwise)

Preceding gene: 13488331

Following gene: 13488118

Centisome position: 50.42

GC content: 58.02

Gene sequence:

>405_bases
TTGAGTGAATGCCGGATGCTGTTCATACCGGCCAATGCGTTGAGGAAGCTCGTCGTCGAACTTCCGAATTTTGCGCTCTG
CCTTCTGCAGGGGCTTGCGGCGAAAGGCAGATGCTACTCGGCGATGGCTCAGATGCTGGGCACCCGTTCGGTGATCGAAC
GTCTGGCGCAGTTCCTGATGAATCTCGGCAGCCTTCATGGCGTGCGCGATGGAAAGGCAATCGTCATCAATGCCAAGGTG
ACGCATGACCAGATTGCGGCCATGGTTGGCTCCACACGCCAATGGGTGACGATGATGATGAAGCGCTTCCAGAAGGAAGG
GCTGGTGACGGTGACGCCGCGCCATATCCGTATCGAACGCCCTCACACGTTGATGGAAATGGTTTCGAAGCGCGCGGCGG
GGTGA

Upstream 100 bases:

>100_bases
CGCGAACAGAAACGGAACATACGCTGGACGGATAGGAATAGGTTCCTTATTCCTATCATGATCTGGGTGAGAAAGGACCG
ACGGCGAGACGGGAGAAGCA

Downstream 100 bases:

>100_bases
GGCTGCGCTTCGGCTTCCACTAGACGTCATGTTCCGAGGCGGAGATCGGTGGCCCGCCCTTTCGTGCGATTAAAAGACGA
GGGTTGCTCGGATGGGCCGA

Product: regulatory protein

Products: NA

Alternate protein names: Transcriptional Regulator Crp/Fnr Family; CRP/FNR Family Transcriptional Regulator; Transcriptional Regulator; Regulatory Protein; Cyclic-AMP Receptor-Like Protein

Number of amino acids: Translated: 134; Mature: 133

Protein sequence:

>134_residues
MSECRMLFIPANALRKLVVELPNFALCLLQGLAAKGRCYSAMAQMLGTRSVIERLAQFLMNLGSLHGVRDGKAIVINAKV
THDQIAAMVGSTRQWVTMMMKRFQKEGLVTVTPRHIRIERPHTLMEMVSKRAAG

Sequences:

>Translated_134_residues
MSECRMLFIPANALRKLVVELPNFALCLLQGLAAKGRCYSAMAQMLGTRSVIERLAQFLMNLGSLHGVRDGKAIVINAKV
THDQIAAMVGSTRQWVTMMMKRFQKEGLVTVTPRHIRIERPHTLMEMVSKRAAG
>Mature_133_residues
SECRMLFIPANALRKLVVELPNFALCLLQGLAAKGRCYSAMAQMLGTRSVIERLAQFLMNLGSLHGVRDGKAIVINAKVT
HDQIAAMVGSTRQWVTMMMKRFQKEGLVTVTPRHIRIERPHTLMEMVSKRAAG

Specific function: Global Transcription Factor That Controls The Expression Of Over 100 Target Genes In Response To Anoxia. It Facilitates The Adaptation To Anaerobic Growth Conditions By Regulating The Expression Of Gene Products That Are Involved In Anaerobic Energy Metab

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14966; Mature: 14835

Theoretical pI: Translated: 11.31; Mature: 11.31

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
8.2 %Met     (Translated Protein)
10.4 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
7.5 %Met     (Mature Protein)
9.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSECRMLFIPANALRKLVVELPNFALCLLQGLAAKGRCYSAMAQMLGTRSVIERLAQFLM
CCCCEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
NLGSLHGVRDGKAIVINAKVTHDQIAAMVGSTRQWVTMMMKRFQKEGLVTVTPRHIRIER
HHHHHCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEEECC
PHTLMEMVSKRAAG
CHHHHHHHHHHCCC
>Mature Secondary Structure 
SECRMLFIPANALRKLVVELPNFALCLLQGLAAKGRCYSAMAQMLGTRSVIERLAQFLM
CCCEEEEECHHHHHHHHHHCCCHHHHHHHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHH
NLGSLHGVRDGKAIVINAKVTHDQIAAMVGSTRQWVTMMMKRFQKEGLVTVTPRHIRIER
HHHHHCCCCCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHCCCEEECCCEEEECC
PHTLMEMVSKRAAG
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA