Definition Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence.
Accession NC_002679
Length 351,911

Click here to switch to the map view.

The map label for this gene is phnJ [H]

Identifier: 13488096

GI number: 13488096

Start: 132001

End: 132891

Strand: Reverse

Name: phnJ [H]

Synonym: mll9152

Alternate gene names: 13488096

Gene position: 132891-132001 (Counterclockwise)

Preceding gene: 13488097

Following gene: 13488095

Centisome position: 37.76

GC content: 57.35

Gene sequence:

>891_bases
ATGAGGAGTATCACCACAAATTATAGCGACGACGGCTATAACTTCGCTTTTCTCGATGAGCAGACCAAACGGATGGTCCG
TCGGACGCTGCTTAAAGCCCTCTCTATCCCTGGATATCAAGTACCATTCGGTGGTCGTGAGATGCCGCTCGCCTCTGGCT
GGGGCACCGGCGGGATTCAGATTACGGCAAGCGTCCTTGGCCCGAACGATCGCCTGAAGGTGATTGACCAAGGCGCAGAC
GACACCACCAACGCCGTCTCCATCCGCCGCTTTTTCCAGACGGTCGCCGACATATCCGTCACCGAATCCACCGAGGAAGC
AACCATCATTCAGACGCGCCACCGTGTGCCGGAAGCACCGCTTACGGAAGGCCAGATCCTCGTATATCAGGTTCCGGAAC
CTGAGCCTTTGCGGAAGCTGATCCCGCGCGAGAGCGAAACTCGCAAAATGCATGCCTATGCCGAGTACGGCGCCATGCAG
GTGACGCTCTATGAGAACATCGCCCGTTTCGGCCGTATCGCCAAGACGTACGACTATCCGGCGATGATCAATGGCAGGTT
TCTCATGTCGCCATCGCCGATCCCGAAGTTTGATAATCCAAAAATGGCAAACAACCCCGCAATTCAATTTTGGGGAGCGG
GCCGAGAAAAACGTATCTATGCCGTGCCGCCCTACACTTCCGTCCGCAGCCTCGATTTCGACGACCATCCGTTCGAGGTG
CAGACCTGGCAAGGATGCTGCGCACTTTGTGGGTCAACCGTGAGCTACCTCGACGAGGTGATCACCGACGACAAGGGGTC
GCGCATGTTCGTCTGCTCCGACACCGATTTCTGCAACACTCGTCAGGCCCAGGCTGCGGCACAACCGAACAGCGCCGGAG
GGGAGTCATGA

Upstream 100 bases:

>100_bases
CGCACTACGTCGACTTCCAGGCGGAGCTGCAGCTCGTGCGGCAATTGCGGGCGGAATATGAAGCTGCCCGCGCAGCCGCA
CAGACGAGGGAGGCTGCAGA

Downstream 100 bases:

>100_bases
CCATGAATGCGATCCCCAAGCTCGCCCCGAAACCGGCCCTCCTCGACGTCGTCGGTCTGTCAAAGTCCTATGGTGGGCAG
ATTGGGTGCCGCGATATTTC

Product: phosphonate metabolism protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 296; Mature: 296

Protein sequence:

>296_residues
MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD
DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ
VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV
QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES

Sequences:

>Translated_296_residues
MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD
DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ
VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV
QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES
>Mature_296_residues
MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD
DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ
VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV
QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3627

COG function: function code P; Uncharacterized enzyme of phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phnJ family [H]

Homologues:

Organism=Escherichia coli, GI1790536, Length=277, Percent_Identity=71.1191335740072, Blast_Score=427, Evalue=1e-121,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010306 [H]

Pfam domain/function: PF06007 PhnJ [H]

EC number: NA

Molecular weight: Translated: 32992; Mature: 32992

Theoretical pI: Translated: 5.45; Mature: 5.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQ
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEE
ITASVLGPNDRLKVIDQGADDTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAP
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCCCC
LTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQVTLYENIARFGRIAKTYDYP
CCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC
AMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV
EEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEE
QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES
HHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQ
CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEE
ITASVLGPNDRLKVIDQGADDTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAP
EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCCCC
LTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQVTLYENIARFGRIAKTYDYP
CCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC
AMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV
EEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEE
QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES
HHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]