| Definition | Mesorhizobium loti MAFF303099 plasmid pMLa, complete sequence. |
|---|---|
| Accession | NC_002679 |
| Length | 351,911 |
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The map label for this gene is phnJ [H]
Identifier: 13488096
GI number: 13488096
Start: 132001
End: 132891
Strand: Reverse
Name: phnJ [H]
Synonym: mll9152
Alternate gene names: 13488096
Gene position: 132891-132001 (Counterclockwise)
Preceding gene: 13488097
Following gene: 13488095
Centisome position: 37.76
GC content: 57.35
Gene sequence:
>891_bases ATGAGGAGTATCACCACAAATTATAGCGACGACGGCTATAACTTCGCTTTTCTCGATGAGCAGACCAAACGGATGGTCCG TCGGACGCTGCTTAAAGCCCTCTCTATCCCTGGATATCAAGTACCATTCGGTGGTCGTGAGATGCCGCTCGCCTCTGGCT GGGGCACCGGCGGGATTCAGATTACGGCAAGCGTCCTTGGCCCGAACGATCGCCTGAAGGTGATTGACCAAGGCGCAGAC GACACCACCAACGCCGTCTCCATCCGCCGCTTTTTCCAGACGGTCGCCGACATATCCGTCACCGAATCCACCGAGGAAGC AACCATCATTCAGACGCGCCACCGTGTGCCGGAAGCACCGCTTACGGAAGGCCAGATCCTCGTATATCAGGTTCCGGAAC CTGAGCCTTTGCGGAAGCTGATCCCGCGCGAGAGCGAAACTCGCAAAATGCATGCCTATGCCGAGTACGGCGCCATGCAG GTGACGCTCTATGAGAACATCGCCCGTTTCGGCCGTATCGCCAAGACGTACGACTATCCGGCGATGATCAATGGCAGGTT TCTCATGTCGCCATCGCCGATCCCGAAGTTTGATAATCCAAAAATGGCAAACAACCCCGCAATTCAATTTTGGGGAGCGG GCCGAGAAAAACGTATCTATGCCGTGCCGCCCTACACTTCCGTCCGCAGCCTCGATTTCGACGACCATCCGTTCGAGGTG CAGACCTGGCAAGGATGCTGCGCACTTTGTGGGTCAACCGTGAGCTACCTCGACGAGGTGATCACCGACGACAAGGGGTC GCGCATGTTCGTCTGCTCCGACACCGATTTCTGCAACACTCGTCAGGCCCAGGCTGCGGCACAACCGAACAGCGCCGGAG GGGAGTCATGA
Upstream 100 bases:
>100_bases CGCACTACGTCGACTTCCAGGCGGAGCTGCAGCTCGTGCGGCAATTGCGGGCGGAATATGAAGCTGCCCGCGCAGCCGCA CAGACGAGGGAGGCTGCAGA
Downstream 100 bases:
>100_bases CCATGAATGCGATCCCCAAGCTCGCCCCGAAACCGGCCCTCCTCGACGTCGTCGGTCTGTCAAAGTCCTATGGTGGGCAG ATTGGGTGCCGCGATATTTC
Product: phosphonate metabolism protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 296; Mature: 296
Protein sequence:
>296_residues MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES
Sequences:
>Translated_296_residues MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES >Mature_296_residues MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQITASVLGPNDRLKVIDQGAD DTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAPLTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQ VTLYENIARFGRIAKTYDYPAMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3627
COG function: function code P; Uncharacterized enzyme of phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phnJ family [H]
Homologues:
Organism=Escherichia coli, GI1790536, Length=277, Percent_Identity=71.1191335740072, Blast_Score=427, Evalue=1e-121,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010306 [H]
Pfam domain/function: PF06007 PhnJ [H]
EC number: NA
Molecular weight: Translated: 32992; Mature: 32992
Theoretical pI: Translated: 5.45; Mature: 5.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQ CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEE ITASVLGPNDRLKVIDQGADDTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAP EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCCCC LTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQVTLYENIARFGRIAKTYDYP CCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC AMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV EEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEE QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES HHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC >Mature Secondary Structure MRSITTNYSDDGYNFAFLDEQTKRMVRRTLLKALSIPGYQVPFGGREMPLASGWGTGGIQ CCCCCCCCCCCCCEEEEECHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCEE ITASVLGPNDRLKVIDQGADDTTNAVSIRRFFQTVADISVTESTEEATIIQTRHRVPEAP EEEEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHCCCCCC LTEGQILVYQVPEPEPLRKLIPRESETRKMHAYAEYGAMQVTLYENIARFGRIAKTYDYP CCCCEEEEEECCCCCHHHHHCCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHCCCC AMINGRFLMSPSPIPKFDNPKMANNPAIQFWGAGREKRIYAVPPYTSVRSLDFDDHPFEV EEECCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCEEEECCCCCCEEECCCCCCCCEE QTWQGCCALCGSTVSYLDEVITDDKGSRMFVCSDTDFCNTRQAQAAAQPNSAGGES HHHHHHHHHHCCHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]