Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13476678

Identifier: 13476678

GI number: 13476678

Start: 6638478

End: 6638765

Strand: Direct

Name: 13476678

Synonym: msr8065

Alternate gene names: NA

Gene position: 6638478-6638765 (Clockwise)

Preceding gene: 13476671

Following gene: 13476682

Centisome position: 94.35

GC content: 56.25

Gene sequence:

>288_bases
GTGGCGGTGACGATGGTGCGATCTATCCATCGGCCCTCGGATAATGACGGCGTCGGAGCGGTGATGACGGCGGCCGTGGT
CGTAGAATGCAATATCCCCATGGCGGCGGTGATGGAGACGATGTCCTTCACGGTAGACAACCACGCGGTCATTGTTCCAG
TGATGGTGTCGGTGATGTCGATGAGTCTGGACTACGATCGCGTCGGCCGAGGCCACGGACGGTACGAGAAGGCACAGTGC
CAAAGTACCAAGCATGACGGCTTTCATTTAAGATCCTCAAGTAATTAA

Upstream 100 bases:

>100_bases
CACTCACTAAATCGTAGTGCGTGATGCCCGGCTCTAATTTGAGAGCCGGGCCAAAAGGCTTCGGTCAATATCCGTTGTTG
TCGTCCTGCTGAATGACAAC

Downstream 100 bases:

>100_bases
GACGGCCCTTCGCCAGCTTAACATTGTGCGATCGCTTTGGTTCCGACATGAAAAGCGTGCGCAGGCTGTTCTTGCCGAAC
TTTGGATGCTCATGATGGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MAVTMVRSIHRPSDNDGVGAVMTAAVVVECNIPMAAVMETMSFTVDNHAVIVPVMVSVMSMSLDYDRVGRGHGRYEKAQC
QSTKHDGFHLRSSSN

Sequences:

>Translated_95_residues
MAVTMVRSIHRPSDNDGVGAVMTAAVVVECNIPMAAVMETMSFTVDNHAVIVPVMVSVMSMSLDYDRVGRGHGRYEKAQC
QSTKHDGFHLRSSSN
>Mature_94_residues
AVTMVRSIHRPSDNDGVGAVMTAAVVVECNIPMAAVMETMSFTVDNHAVIVPVMVSVMSMSLDYDRVGRGHGRYEKAQCQ
STKHDGFHLRSSSN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10327; Mature: 10196

Theoretical pI: Translated: 7.05; Mature: 7.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
9.5 %Met     (Translated Protein)
11.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
8.5 %Met     (Mature Protein)
10.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTMVRSIHRPSDNDGVGAVMTAAVVVECNIPMAAVMETMSFTVDNHAVIVPVMVSVMS
CCCHHHHHHCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHH
MSLDYDRVGRGHGRYEKAQCQSTKHDGFHLRSSSN
HCCCHHHCCCCCCCCCHHHHCCCCCCCEEECCCCC
>Mature Secondary Structure 
AVTMVRSIHRPSDNDGVGAVMTAAVVVECNIPMAAVMETMSFTVDNHAVIVPVMVSVMS
CCHHHHHHCCCCCCCCCHHHHHEEEEEECCCCHHHHHHHHHHCCCCCEEHHHHHHHHHH
MSLDYDRVGRGHGRYEKAQCQSTKHDGFHLRSSSN
HCCCHHHCCCCCCCCCHHHHCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA