| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476654
Identifier: 13476654
GI number: 13476654
Start: 6618575
End: 6619462
Strand: Direct
Name: 13476654
Synonym: mlr8038
Alternate gene names: NA
Gene position: 6618575-6619462 (Clockwise)
Preceding gene: 13476653
Following gene: 13476657
Centisome position: 94.07
GC content: 50.68
Gene sequence:
>888_bases ATGAACGAAGTTGGAGCATTTCTTGTTGGCTGCACTTGCCGCCACTGGCAGGGAGGGCGTAACTGTACAAGATATCTAGG GGTTTTAGGGGCGGTGGGGATGCATAAGCCTACTTTGGCGAGGGTGATAGCTGCGCCTTTTTTGTTTTTCATAGTGCTCT TAATTGCCGCCTGGACCTCGGGGTATCAGGAAATAATATGTGAGGAGACAAAGAGGGGCGAGGAACTGTGCTCTGCCTAT AACCTTGCTTTTTTCTTCCTCATTAAGCTCAGAGAATTTGTCGATAAATACGACGGACTTATCACCGCGCTGGCCACATT GGCGATCGGGGCTTTCACCTACACTCTCTGGAAATCCACTGACAAGCTGTGGAGGGCCGGACGCGATGAATTTATCGCAG GCAGGCGACCCTGGACGGGAATAGTCAGCGTAAAAATGGGCAGTTCGCTCAGCATCAGTGAGACGAGCGTTACTGGGACC CTTTCCTTCGAGTTGAGAAACTTCGGAAATTCTCCGGCAGAGTATGTTTTGGGCCAAGCAAAGTTCTTTGCGTTTGAGCA AGTCGGCGATGCTGTGCAGTTTTCCGGTCGAGCGGAGCGCACACTCGGGAGCGTAGGCACGACAATTTTTCCTGGCCAGA TCCTGCCAGATCAGAATATTGGTTTCTTCACACTGCCCGAGGAAGGGTTCATCTCGCCTACACAATCTGGGTTCCTTGCC GGAAATATCCGCTACTTTTTCTCCGTTGACGATAGTTTCCACACGACGCCATTCGTCTATCTTTTGAGCAGAAATGATGG CAGCGCGTTGTTCGATGGTAATCCCACAATCATCAAGGCGGATGATCTGACAATTCTACCAACTCCCATGGGCAAAAGCC CGACTTAA
Upstream 100 bases:
>100_bases TGGGTCTGGGTGCCCTGGGAGTGACCGGAATGGCGGCGGCTGCTTTGGCATCGCTCGTAACCGCCTATTGGGGCGATATC TGGCGGGTGCTGCGAGGTGG
Downstream 100 bases:
>100_bases CTGCGTGGCCATCAATATGACCCCGAAGAAAACCGCGCCAATCATGCCAGCCATCCGACGGCGTCGCACTCACTGGTCGC TTTTGGCGGTGGTCGTATGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 295; Mature: 295
Protein sequence:
>295_residues MNEVGAFLVGCTCRHWQGGRNCTRYLGVLGAVGMHKPTLARVIAAPFLFFIVLLIAAWTSGYQEIICEETKRGEELCSAY NLAFFFLIKLREFVDKYDGLITALATLAIGAFTYTLWKSTDKLWRAGRDEFIAGRRPWTGIVSVKMGSSLSISETSVTGT LSFELRNFGNSPAEYVLGQAKFFAFEQVGDAVQFSGRAERTLGSVGTTIFPGQILPDQNIGFFTLPEEGFISPTQSGFLA GNIRYFFSVDDSFHTTPFVYLLSRNDGSALFDGNPTIIKADDLTILPTPMGKSPT
Sequences:
>Translated_295_residues MNEVGAFLVGCTCRHWQGGRNCTRYLGVLGAVGMHKPTLARVIAAPFLFFIVLLIAAWTSGYQEIICEETKRGEELCSAY NLAFFFLIKLREFVDKYDGLITALATLAIGAFTYTLWKSTDKLWRAGRDEFIAGRRPWTGIVSVKMGSSLSISETSVTGT LSFELRNFGNSPAEYVLGQAKFFAFEQVGDAVQFSGRAERTLGSVGTTIFPGQILPDQNIGFFTLPEEGFISPTQSGFLA GNIRYFFSVDDSFHTTPFVYLLSRNDGSALFDGNPTIIKADDLTILPTPMGKSPT >Mature_295_residues MNEVGAFLVGCTCRHWQGGRNCTRYLGVLGAVGMHKPTLARVIAAPFLFFIVLLIAAWTSGYQEIICEETKRGEELCSAY NLAFFFLIKLREFVDKYDGLITALATLAIGAFTYTLWKSTDKLWRAGRDEFIAGRRPWTGIVSVKMGSSLSISETSVTGT LSFELRNFGNSPAEYVLGQAKFFAFEQVGDAVQFSGRAERTLGSVGTTIFPGQILPDQNIGFFTLPEEGFISPTQSGFLA GNIRYFFSVDDSFHTTPFVYLLSRNDGSALFDGNPTIIKADDLTILPTPMGKSPT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32423; Mature: 32423
Theoretical pI: Translated: 6.27; Mature: 6.27
Prosite motif: PS00022 EGF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEVGAFLVGCTCRHWQGGRNCTRYLGVLGAVGMHKPTLARVIAAPFLFFIVLLIAAWTS CCCCCEEEEECEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GYQEIICEETKRGEELCSAYNLAFFFLIKLREFVDKYDGLITALATLAIGAFTYTLWKST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKLWRAGRDEFIAGRRPWTGIVSVKMGSSLSISETSVTGTLSFELRNFGNSPAEYVLGQA HHHHHCCCHHHCCCCCCCCEEEEEECCCCCEEECCEEEEEEEEEEECCCCCHHHHHHHHH KFFAFEQVGDAVQFSGRAERTLGSVGTTIFPGQILPDQNIGFFTLPEEGFISPTQSGFLA HHHHHHHHCCHHHCCCCHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEE GNIRYFFSVDDSFHTTPFVYLLSRNDGSALFDGNPTIIKADDLTILPTPMGKSPT ECEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCEEEEECCCCCCCC >Mature Secondary Structure MNEVGAFLVGCTCRHWQGGRNCTRYLGVLGAVGMHKPTLARVIAAPFLFFIVLLIAAWTS CCCCCEEEEECEEECCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCC GYQEIICEETKRGEELCSAYNLAFFFLIKLREFVDKYDGLITALATLAIGAFTYTLWKST CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DKLWRAGRDEFIAGRRPWTGIVSVKMGSSLSISETSVTGTLSFELRNFGNSPAEYVLGQA HHHHHCCCHHHCCCCCCCCEEEEEECCCCCEEECCEEEEEEEEEEECCCCCHHHHHHHHH KFFAFEQVGDAVQFSGRAERTLGSVGTTIFPGQILPDQNIGFFTLPEEGFISPTQSGFLA HHHHHHHHCCHHHCCCCHHHHHHHCCCEECCCCCCCCCCCCEEECCCCCCCCCCCCCEEE GNIRYFFSVDDSFHTTPFVYLLSRNDGSALFDGNPTIIKADDLTILPTPMGKSPT ECEEEEEEECCCCCCCEEEEEEECCCCCEEECCCCCEEEECCEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA