| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476639
Identifier: 13476639
GI number: 13476639
Start: 6603822
End: 6605399
Strand: Direct
Name: 13476639
Synonym: mlr8020
Alternate gene names: NA
Gene position: 6603822-6605399 (Clockwise)
Preceding gene: 13476638
Following gene: 13476640
Centisome position: 93.86
GC content: 62.36
Gene sequence:
>1578_bases GTGACTGTTGCTTCTCTCGGCATCGCCGTAGATTCGTCTCAGGCCGTCGCGGCAAAGACGAACCTCGACAACATGTCGGC AGCTTCGGCCAAGGCCGAGGCTGCGCAGAAGCGGCTGTCGTCGGCCTCGTCGGCCTCCAATGCGGCGCTCTCCAAGATCG CCGCGGGCATCGACCAGGCGAACGCCACGCTCGTCAAGCTGGCCAGCATCGCCGAGGGCAGCAATGCCTCGCTGGCCAAG CTGGTCTTCACTGCGGAAAAGACCAACACGACGCTGGCAAGCATCGGCACCGGCTCGACGCAGGTTGTGTCCGGCATCGG TAAAGTGGCCCCGGCGGCGGACAAGTCGACCAAAGCCCTCAATGACAACGCCAATGCAGCGCGGCTGACTTCGAACCAGA TGCTCAATCTGTCGCGCCAAGGCAACGACGTCATCACCATGTTCGCCTTGGGTGCGTCCCCGGTGCAGATCTTTGCCTCC CAGATTGGCCAAGTCTACGACGCGTTGGAAAGCGGTCCGCGCGGCCTTCGCGGATCGCTGTCGGCCATCGGCGCTACGGC TAAATCGGCTGGGCAGGCGCTCCTCGCATTCATGGTGACGCCGGCTGGTCTTGCCGCTGGTGCTGGCGTAGCGGCTGTTG CTGGCCTTGCCACCTACATCATCTCGACGCGCAAGGAAGTGAAGAGCCTCGACGATCTGTTGAAGGATCATGCTTCCGTC TTGCGCGGTATTGGCGATATCTATGGATCGATCGCCGACAAGGCAAAGAGCGCCTTCTCCGTCTCGAACCTGAACGGTCT GCAATTGCTGTCGTCAGCGACGCAGGCCGGGCTGAAAATTCAGATTGCCAATCAGACACGCGGGTCGTTCGGCGACATCC TGATTGACCGGGGCGGCGGCGGATCGGGCAATCAGTTCGGTCCGCAAAATGTGGTTTCGTCGGAGTTCAAGCCATTCACG GATGCTATTGATTATCTGCGGAAAACAGCCCGCGAGGGAACGCCCGACATCATCGGCTTCCGCAAGATGGTCGAGGACAA GTGGGCGCTTGATCCGAACAATGCCGCGTTGACGGAATCGGCCGGCAAGCTGATCGATCTGACCAAGGACGCGGATGACG CCGCACGCGCGTTGAAGCAGTTGGAGATCGCCCAAGAGGCGCTTGCCAGGAGCGTGGGCCCCGGCGGCTTGCCCTTGCGT CGTGGCTCTCTCAGCACTGAAGACATGGGTGCCTATGAGCGATACCGGGCGGCCGGCTCTGTGTCGGCTGATCGCGCACA ACAGTCATTCGATGCTCAGCGTCAGGGCCTCTATGCCCGTTCGCCAGCCGAACTGGCGGCCGCTGCTCGAGCTCAGGCCA GCGCCCAGTACAACGACAACGAGAACCCGGCGGAGCGTGCCCGGCGTATCGACATGGCCGGCCAGCAAGCCGCGCTTGCC GCGCAGCACGCCTTGGATGAAGCGCAGAAGGATCGGAAACGTTCGCTCGACCAGACGCTCGCCTCGCAGCAACTCGACCT TGACCTGATCGGCAAAACGACCGGTGCCGCTGAAGCGATGCGGATGCAGTCCAGTTGA
Upstream 100 bases:
>100_bases CGTATTTGGCGAACCCGAAAAACCGGCGATCGAGATCACCGCTCAGCCCATCAGCGAGGCCTATTTCGATGCGATGTTTG CGGTGGAATGAGGTGGCGAA
Downstream 100 bases:
>100_bases CGCAGCAGCTTCGTGAGGAAGCCGCGCGGAACAATGTCCCCGTCGATCAACAGGAACTCGAGCTGATCAAACAGAAGGCC GATGCCTATGGCAAGATGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 525; Mature: 524
Protein sequence:
>525_residues MTVASLGIAVDSSQAVAAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGIDQANATLVKLASIAEGSNASLAK LVFTAEKTNTTLASIGTGSTQVVSGIGKVAPAADKSTKALNDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFAS QIGQVYDALESGPRGLRGSLSAIGATAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKSLDDLLKDHASV LRGIGDIYGSIADKAKSAFSVSNLNGLQLLSSATQAGLKIQIANQTRGSFGDILIDRGGGGSGNQFGPQNVVSSEFKPFT DAIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTESAGKLIDLTKDADDAARALKQLEIAQEALARSVGPGGLPLR RGSLSTEDMGAYERYRAAGSVSADRAQQSFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALA AQHALDEAQKDRKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQSS
Sequences:
>Translated_525_residues MTVASLGIAVDSSQAVAAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGIDQANATLVKLASIAEGSNASLAK LVFTAEKTNTTLASIGTGSTQVVSGIGKVAPAADKSTKALNDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFAS QIGQVYDALESGPRGLRGSLSAIGATAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKSLDDLLKDHASV LRGIGDIYGSIADKAKSAFSVSNLNGLQLLSSATQAGLKIQIANQTRGSFGDILIDRGGGGSGNQFGPQNVVSSEFKPFT DAIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTESAGKLIDLTKDADDAARALKQLEIAQEALARSVGPGGLPLR RGSLSTEDMGAYERYRAAGSVSADRAQQSFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALA AQHALDEAQKDRKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQSS >Mature_524_residues TVASLGIAVDSSQAVAAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGIDQANATLVKLASIAEGSNASLAKL VFTAEKTNTTLASIGTGSTQVVSGIGKVAPAADKSTKALNDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFASQ IGQVYDALESGPRGLRGSLSAIGATAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKSLDDLLKDHASVL RGIGDIYGSIADKAKSAFSVSNLNGLQLLSSATQAGLKIQIANQTRGSFGDILIDRGGGGSGNQFGPQNVVSSEFKPFTD AIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTESAGKLIDLTKDADDAARALKQLEIAQEALARSVGPGGLPLRR GSLSTEDMGAYERYRAAGSVSADRAQQSFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALAA QHALDEAQKDRKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54132; Mature: 54001
Theoretical pI: Translated: 9.53; Mature: 9.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVASLGIAVDSSQAVAAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGIDQA CCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC NATLVKLASIAEGSNASLAKLVFTAEKTNTTLASIGTGSTQVVSGIGKVAPAADKSTKAL CHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHH NDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFASQIGQVYDALESGPRGLRGSL CCCCCHHEECHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH SAIGATAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKSLDDLLKDHASV HHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGIGDIYGSIADKAKSAFSVSNLNGLQLLSSATQAGLKIQIANQTRGSFGDILIDRGGG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCC GSGNQFGPQNVVSSEFKPFTDAIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTES CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHC AGKLIDLTKDADDAARALKQLEIAQEALARSVGPGGLPLRRGSLSTEDMGAYERYRAAGS CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC VSADRAQQSFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH AQHALDEAQKDRKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQSS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCC >Mature Secondary Structure TVASLGIAVDSSQAVAAKTNLDNMSAASAKAEAAQKRLSSASSASNAALSKIAAGIDQA CEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHC NATLVKLASIAEGSNASLAKLVFTAEKTNTTLASIGTGSTQVVSGIGKVAPAADKSTKAL CHHHHHHHHHCCCCCCCEEEEEEEECCCCCEEEECCCCHHHHHHHHHHHCCCCCCCHHHH NDNANAARLTSNQMLNLSRQGNDVITMFALGASPVQIFASQIGQVYDALESGPRGLRGSL CCCCCHHEECHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHH SAIGATAKSAGQALLAFMVTPAGLAAGAGVAAVAGLATYIISTRKEVKSLDDLLKDHASV HHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LRGIGDIYGSIADKAKSAFSVSNLNGLQLLSSATQAGLKIQIANQTRGSFGDILIDRGGG HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCC GSGNQFGPQNVVSSEFKPFTDAIDYLRKTAREGTPDIIGFRKMVEDKWALDPNNAALTES CCCCCCCCHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCHHHHC AGKLIDLTKDADDAARALKQLEIAQEALARSVGPGGLPLRRGSLSTEDMGAYERYRAAGS CCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHCCC VSADRAQQSFDAQRQGLYARSPAELAAAARAQASAQYNDNENPAERARRIDMAGQQAALA CCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCHHHHHH AQHALDEAQKDRKRSLDQTLASQQLDLDLIGKTTGAAEAMRMQSS HHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA