| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13476565
Identifier: 13476565
GI number: 13476565
Start: 6544248
End: 6545174
Strand: Direct
Name: 13476565
Synonym: mlr7925
Alternate gene names: NA
Gene position: 6544248-6545174 (Clockwise)
Preceding gene: 13476564
Following gene: 13476566
Centisome position: 93.01
GC content: 63.32
Gene sequence:
>927_bases ATGGTCCAACACAGGGATAGAGCCCCAGGCCGATTGTTTCGGCATGGATCAAGTTCGATATCCGCGCTTGTCTTTGCTGC CGGCGCGGTGGCTTTGTGGTCGACCAATGCCTTGGTCGGCAAATCCCTGCTGGCAACCCATCCGGTATCGCAAGTGCAGT TCCTGCAATTTGCGGGAGCTGCACTGGTCTTCGCCTTGATCCGGTTCATGAGCCGTGAGGCGGCTCCATCGGTCGCGCCC CGGGCCGCGGTCGCAGCGCTTGCCGTCGGCATCATCGGTCTGGTCGGCACCATGGTGCTGCAATACATCGCCTTCGCCTC GATGCCGGTGATCGAAGCCAATCTCGTGGCCTACACCTGGCCCTTGATGGTCGCCGCGGCGGTGATCGCCTTCGACAATC CCCGGCGTCCGGCCTTGCTGGGTCTTGCCGCGGTCCTTGGGTTTGTCGGCGTCGCGCTGGTGATTTCGGGAGGGCGTGAG AACAACTGGTTCCAAGGCGATCTCGTCGGCTATTTCGCCGCATTCGGGTCTGCGCTGTGCATGGCGTTCTATTCGGTGAT GGTGGGACGGCTCGCCACTTCGCCCGATCGCCTGCTGCTACCTTCATCGCTGGTCGGCGTCGCCTTGGCGCTTCTATGGT CCGCTGGCGAAGGCGTCGCCTGGCCCGCCGGCATGGATCTGGCCCTCGGGCTCTATCTCGGCGCCGGCCCGATGGGGCTG GGTTATTACTTCTGGTCGCGCGCCTTGAAGCTTGAAGGCAGCGGCAAGGTCGCGGTCGTCGCCTATCTCACGCCGATTGC GTCGACATTGCTGCTGACGCTGTCCGGGGAACAGTTGACGACGACCGCCATTGCCGGCGCTGTCCTCGTCATCGGCAGTT GTATCGCGGTCGGTCTGGAGCGCTCGGAGGCGCAAGACTATGTTTGA
Upstream 100 bases:
>100_bases GCCCGCTCCGGCCTCCGAAACACAGGTTTCGGGCGGAGCCAGGGGATCATGGTAGTCAACCATGATCCCGAGAAGTGGGA GCCGGTCTTCGGACGAGATC
Downstream 100 bases:
>100_bases CGACAATGAACGTCTCGCTAGGCAGGAAGCGCATTGGCTGATCAAGGAATTTGGCGCCGAGGCACCGCTTTACGCGGCGA TGAAGGCTGAAAAGGCGATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 308; Mature: 308
Protein sequence:
>308_residues MVQHRDRAPGRLFRHGSSSISALVFAAGAVALWSTNALVGKSLLATHPVSQVQFLQFAGAALVFALIRFMSREAAPSVAP RAAVAALAVGIIGLVGTMVLQYIAFASMPVIEANLVAYTWPLMVAAAVIAFDNPRRPALLGLAAVLGFVGVALVISGGRE NNWFQGDLVGYFAAFGSALCMAFYSVMVGRLATSPDRLLLPSSLVGVALALLWSAGEGVAWPAGMDLALGLYLGAGPMGL GYYFWSRALKLEGSGKVAVVAYLTPIASTLLLTLSGEQLTTTAIAGAVLVIGSCIAVGLERSEAQDYV
Sequences:
>Translated_308_residues MVQHRDRAPGRLFRHGSSSISALVFAAGAVALWSTNALVGKSLLATHPVSQVQFLQFAGAALVFALIRFMSREAAPSVAP RAAVAALAVGIIGLVGTMVLQYIAFASMPVIEANLVAYTWPLMVAAAVIAFDNPRRPALLGLAAVLGFVGVALVISGGRE NNWFQGDLVGYFAAFGSALCMAFYSVMVGRLATSPDRLLLPSSLVGVALALLWSAGEGVAWPAGMDLALGLYLGAGPMGL GYYFWSRALKLEGSGKVAVVAYLTPIASTLLLTLSGEQLTTTAIAGAVLVIGSCIAVGLERSEAQDYV >Mature_308_residues MVQHRDRAPGRLFRHGSSSISALVFAAGAVALWSTNALVGKSLLATHPVSQVQFLQFAGAALVFALIRFMSREAAPSVAP RAAVAALAVGIIGLVGTMVLQYIAFASMPVIEANLVAYTWPLMVAAAVIAFDNPRRPALLGLAAVLGFVGVALVISGGRE NNWFQGDLVGYFAAFGSALCMAFYSVMVGRLATSPDRLLLPSSLVGVALALLWSAGEGVAWPAGMDLALGLYLGAGPMGL GYYFWSRALKLEGSGKVAVVAYLTPIASTLLLTLSGEQLTTTAIAGAVLVIGSCIAVGLERSEAQDYV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31932; Mature: 31932
Theoretical pI: Translated: 9.02; Mature: 9.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQHRDRAPGRLFRHGSSSISALVFAAGAVALWSTNALVGKSLLATHPVSQVQFLQFAGA CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH ALVFALIRFMSREAAPSVAPRAAVAALAVGIIGLVGTMVLQYIAFASMPVIEANLVAYTW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH PLMVAAAVIAFDNPRRPALLGLAAVLGFVGVALVISGGRENNWFQGDLVGYFAAFGSALC HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH MAFYSVMVGRLATSPDRLLLPSSLVGVALALLWSAGEGVAWPAGMDLALGLYLGAGPMGL HHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHH GYYFWSRALKLEGSGKVAVVAYLTPIASTLLLTLSGEQLTTTAIAGAVLVIGSCIAVGLE HHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCC RSEAQDYV HHHCCCCC >Mature Secondary Structure MVQHRDRAPGRLFRHGSSSISALVFAAGAVALWSTNALVGKSLLATHPVSQVQFLQFAGA CCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHH ALVFALIRFMSREAAPSVAPRAAVAALAVGIIGLVGTMVLQYIAFASMPVIEANLVAYTW HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH PLMVAAAVIAFDNPRRPALLGLAAVLGFVGVALVISGGRENNWFQGDLVGYFAAFGSALC HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHH MAFYSVMVGRLATSPDRLLLPSSLVGVALALLWSAGEGVAWPAGMDLALGLYLGAGPMGL HHHHHHHHHHHCCCCCCEECCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHH GYYFWSRALKLEGSGKVAVVAYLTPIASTLLLTLSGEQLTTTAIAGAVLVIGSCIAVGLE HHHHHHHHHEECCCCCEEEEHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHCC RSEAQDYV HHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA