Click here to switch to the map view.

The map label for this gene is yhiR [C]

Identifier: 13476541

GI number: 13476541

Start: 6524718

End: 6525566

Strand: Direct

Name: yhiR [C]

Synonym: mlr7888

Alternate gene names: 13476541

Gene position: 6524718-6525566 (Clockwise)

Preceding gene: 13476540

Following gene: 13476543

Centisome position: 92.73

GC content: 64.31

Gene sequence:

>849_bases
ATGAATTACCGCCACGCCTACCACGCCGGAAATTTCGCCGATGTCGTCAAGCATGTCGTGCTGACGCGGCTGCTCGACTA
TCTCAAGCAGAAGGACAAGGCTTTTCGCGTCGTCGACACCCATGCCGGCATTGGCCGCTATGATCTGTCGTCGCTCGAGG
CGCAGAAGACCGGCGAATGGCAGGGCGGCATCGGCAGGCTGATCGATGCCTCGCTCGACGCCAGGGCGGGTGCGCTGCTG
GCGCCCTATCTGGAAGCGGTGCGGTCGCTCAATCCCGGGGACGGCGTGAAGAAATATCCGGGCTCGCCGCTGCTCGCGCG
CCATCTCCTGCGCAAGCAGGACCGGTTGTCGGCGATCGAACTGCACCCGAAAGACGCCGCCAGACTGAAGGCGGAATTCG
CCGGCGACTTCCAGGTGCGGGTGATGGAACTCGATGGCTGGCTGGCGCTCGGCGCGCATCTGCCGCCGAAGGAAAAGCGC
GGCCTTGTGCTCATCGATCCGCCCTTCGAGGAGGAGGGCGAGTTCGGCCGCCTCGTCGAAGGGCTCATCAGGGCGCACAG
GCGCTGGCCCGGCGGCATCTATGCGCTGTGGTATCCGATCAAGGACCGCAAGGCGGTGATCGCCTTCAGGAAGGCGCTGA
AGCAATCCGGCATCCCGAAAATCCTCGACATAGAATTCGAGATCAGGCCGGCATCTTCGGAGCCCAGCCTCGATGGCAGC
GGCATGGTCGTGGTCAACCCGCCCTTCACGCTGGAAGGCGAATTGCGAACCGTGCTGCCGGCCCTGCACAAACTGCTCGC
CGTGGAAAAGCCGGCGCACTGGTCACTGGAATGGCTGGCGGGGGAGTAG

Upstream 100 bases:

>100_bases
ACTCGCAACCACCGCCGCCGCGTTGGGGCAGGGGTTGACGCATGTCGCCAAAAAGTGTGCAGCGGTTTTGGGGTAACGAC
ATGCGTAACGGCAACAGATC

Downstream 100 bases:

>100_bases
GCGGGCATGGCTTCGGCCGGGTTGGCCGGGACGCCGCTATACTCCAGCGGCAACCAGCGCCGCCGGGGTGATGCCGGATA
GCCGCCTGCTTTCGCGTATC

Product: hypothetical protein

Products: NA

Alternate protein names: ORFJ [H]

Number of amino acids: Translated: 282; Mature: 282

Protein sequence:

>282_residues
MNYRHAYHAGNFADVVKHVVLTRLLDYLKQKDKAFRVVDTHAGIGRYDLSSLEAQKTGEWQGGIGRLIDASLDARAGALL
APYLEAVRSLNPGDGVKKYPGSPLLARHLLRKQDRLSAIELHPKDAARLKAEFAGDFQVRVMELDGWLALGAHLPPKEKR
GLVLIDPPFEEEGEFGRLVEGLIRAHRRWPGGIYALWYPIKDRKAVIAFRKALKQSGIPKILDIEFEIRPASSEPSLDGS
GMVVVNPPFTLEGELRTVLPALHKLLAVEKPAHWSLEWLAGE

Sequences:

>Translated_282_residues
MNYRHAYHAGNFADVVKHVVLTRLLDYLKQKDKAFRVVDTHAGIGRYDLSSLEAQKTGEWQGGIGRLIDASLDARAGALL
APYLEAVRSLNPGDGVKKYPGSPLLARHLLRKQDRLSAIELHPKDAARLKAEFAGDFQVRVMELDGWLALGAHLPPKEKR
GLVLIDPPFEEEGEFGRLVEGLIRAHRRWPGGIYALWYPIKDRKAVIAFRKALKQSGIPKILDIEFEIRPASSEPSLDGS
GMVVVNPPFTLEGELRTVLPALHKLLAVEKPAHWSLEWLAGE
>Mature_282_residues
MNYRHAYHAGNFADVVKHVVLTRLLDYLKQKDKAFRVVDTHAGIGRYDLSSLEAQKTGEWQGGIGRLIDASLDARAGALL
APYLEAVRSLNPGDGVKKYPGSPLLARHLLRKQDRLSAIELHPKDAARLKAEFAGDFQVRVMELDGWLALGAHLPPKEKR
GLVLIDPPFEEEGEFGRLVEGLIRAHRRWPGGIYALWYPIKDRKAVIAFRKALKQSGIPKILDIEFEIRPASSEPSLDGS
GMVVVNPPFTLEGELRTVLPALHKLLAVEKPAHWSLEWLAGE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yhiR [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=282, Percent_Identity=43.2624113475177, Blast_Score=239, Evalue=2e-64,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 31421; Mature: 31421

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNYRHAYHAGNFADVVKHVVLTRLLDYLKQKDKAFRVVDTHAGIGRYDLSSLEAQKTGEW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCC
QGGIGRLIDASLDARAGALLAPYLEAVRSLNPGDGVKKYPGSPLLARHLLRKQDRLSAIE
CCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
LHPKDAARLKAEFAGDFQVRVMELDGWLALGAHLPPKEKRGLVLIDPPFEEEGEFGRLVE
ECCCHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHH
GLIRAHRRWPGGIYALWYPIKDRKAVIAFRKALKQSGIPKILDIEFEIRPASSEPSLDGS
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC
GMVVVNPPFTLEGELRTVLPALHKLLAVEKPAHWSLEWLAGE
CEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure
MNYRHAYHAGNFADVVKHVVLTRLLDYLKQKDKAFRVVDTHAGIGRYDLSSLEAQKTGEW
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHCCCC
QGGIGRLIDASLDARAGALLAPYLEAVRSLNPGDGVKKYPGSPLLARHLLRKQDRLSAIE
CCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEE
LHPKDAARLKAEFAGDFQVRVMELDGWLALGAHLPPKEKRGLVLIDPPFEEEGEFGRLVE
ECCCHHHHHHHHCCCCEEEEEEEECCEEEECCCCCCCCCCCEEEECCCCCCCCCHHHHHH
GLIRAHRRWPGGIYALWYPIKDRKAVIAFRKALKQSGIPKILDIEFEIRPASSEPSLDGS
HHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCC
GMVVVNPPFTLEGELRTVLPALHKLLAVEKPAHWSLEWLAGE
CEEEECCCEEECCHHHHHHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1916268; 7542800; 10675023 [H]